RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 NPAS2Q99743 824 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 CNPY3Q9BT09 278 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 KIR3DX1Q9H7L2 352 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 ZNF446Q9NWS9 450 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 STMN3Q9NZ72 180 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 IL17CQ9P0M4 197 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 C3orf18Q9UK00 162 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 TDRKHQ9Y2W6 561 aaKnown RBP3.34□□□□□ -1.87
ATXN3-217ENST00000553287 L3MBTL1Q9Y468 752 aa3.34□□□□□ -1.87
ATXN3-217ENST00000553287 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.88
ATXN3-217ENST00000553287 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.88
ATXN3-217ENST00000553287 GTF3C1Q12789 2109 aa3.34□□□□□ -1.88
ATXN3-217ENST00000553287 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SVEP1Q4LDE5 3571 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 ATP6AP2A0A1C7CYW4 349 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 A0A1W2PQ67 120 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 RTL8CO15255 209 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 PRPSAP2O60256 369 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 KLHL41O60662 606 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GNA14O95837 355 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 TSPAN12O95859 305 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 HBQ1P09105 142 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GSTA2P09210 222 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 CCDC159P0C7I6 412 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SLC35G4P0C7Q5 338 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 EZRP15311 586 aaKnown RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 ATP6V1B1P15313 513 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 UCHL3P15374 230 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 VCLP18206 1134 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 MAGP20916 626 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 PPP2R1BP30154 601 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SPAM1P38567 509 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 CDH6P55285 790 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 POLR2FP61218 127 aaKnown RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 RPL27P61353 136 aaKnown RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SPHARQ15513 63 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 ANKRD55Q3KP44 614 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GPRC6AQ5T6X5 926 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 FRMPD2BQ6IN97 320 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 CGB2Q6NT52 195 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 CNSTQ6PJW8 725 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SPESP1Q6UW49 350 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 MSANTD1Q6ZTZ1 278 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 LANCL3Q6ZV70 420 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GALNTL5Q7Z4T8 443 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 HOOK3Q86VS8 718 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 BBS5Q8N3I7 341 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 OR5AR1Q8NGP9 310 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 LILRB4Q8NHJ6 448 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GOT1L1Q8NHS2 421 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GTSF1Q8WW33 167 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 FAM162AQ96A26 154 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 ESAMQ96AP7 390 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 TRIB3Q96RU7 358 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 LYSMD1Q96S90 227 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 TUBGCP2Q9BSJ2 902 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 ZSCAN5AQ9BUG6 496 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 POLR1EQ9GZS1 481 aaKnown RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 GANQ9H2C0 597 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SRD5A3Q9H8P0 318 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 IL26Q9NPH9 171 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 KCNJ16Q9NPI9 418 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 ZNF275Q9NSD4 429 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 EURLQ9NYK6 297 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 KCNN3Q9UGI6 736 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 RNF24Q9Y225 148 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 MRPS2Q9Y399 296 aaKnown RBP3.33□□□□□ -1.88
ATXN3-217ENST00000553287 SEC16AO15027 2179 aa3.33□□□□□ -1.88
ATXN3-217ENST00000553287 IGHV1-45A0A0A0MS14 117 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 A0A0J9YY10 115 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 A0A1B0GX78 115 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 BICDL2A1A5D9 508 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 VSTM2BA6NLU5 285 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 C2orf74A8MZ97 194 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 FAM220BPB1ANY3 271 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 IDSB3KWA1 339 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 SAP18O00422 153 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 TTI1O43156 1089 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 SERPINA7P05543 415 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 HSP90AA1P07900 732 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 FCGR3AP08637 254 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 HSD17B1P14061 328 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 PSMB5P28074 263 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 HSPA9P38646 679 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 SSR1P43307 286 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 EMP2P54851 167 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 VSX2P58304 361 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 OC90Q02509 493 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 GBE1Q04446 702 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 SLC34A1Q06495 639 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 MFGE8Q08431 387 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 OR1C1Q15619 314 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 INAQ16352 499 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 NCBP2-AS2Q69YL0 99 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 ATL3Q6DD88 541 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 ARSKQ6UWY0 536 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 NDUFAF7Q7L592 441 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 NLRP9Q7RTR0 991 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 PHF13Q86YI8 300 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms