RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 KLHL17Q6TDP4 642 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 SLC35D2Q76EJ3 337 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 MYPOPQ86VE0 399 aaPredicted RBP16.8■□□□□ 0.28
PTCH1-227ENST00000553256 PGAM4Q8N0Y7 254 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 C10orf53Q8N6V4 93 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 FAM86B1Q8N7N1 296 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 GEMIN6Q8WXD5 167 aaKnown RBP16.8■□□□□ 0.28
PTCH1-227ENST00000553256 LRRC37BQ96QE4 947 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 MRPL13Q9BYD1 178 aaKnown RBP16.8■□□□□ 0.28
PTCH1-227ENST00000553256 GORASP2Q9H8Y8 452 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 SEC61A2Q9H9S3 476 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 DCAF13Q9NV06 445 aaKnown RBP16.8■□□□□ 0.28
PTCH1-227ENST00000553256 TAGLN3Q9UI15 199 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 LAMP3Q9UQV4 416 aa16.8■□□□□ 0.28
PTCH1-227ENST00000553256 A0A096LPE4 126 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 A0A1W2PPZ6 126 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 C11orf98E9PRG8 122 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 M0R1B8 84 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 M0R3G1 203 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 AHCYP23526 432 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 YAP1P46937 504 aaKnown RBP16.79■□□□□ 0.28
PTCH1-227ENST00000553256 CDH11P55287 796 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 RUNX1T1Q06455 604 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 ST3GAL3Q11203 375 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 CAMK2DQ13557 499 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 IFI44LQ53G44 452 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 Q5PR19 223 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 GPR137CQ8N3F9 429 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 LRRC75AQ8NAA5 344 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 FAM156AQ8NDB6 213 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 TMEM171Q8WVE6 324 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 LZICQ8WZA0 190 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 NMD3Q96D46 503 aaKnown RBP16.79■□□□□ 0.28
PTCH1-227ENST00000553256 SGTBQ96EQ0 304 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 ADAD1Q96M93 576 aaKnown RBP16.79■□□□□ 0.28
PTCH1-227ENST00000553256 NOX3Q9HBY0 568 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 EGFL7Q9UHF1 273 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 HIF3AQ9Y2N7 669 aa16.79■□□□□ 0.28
PTCH1-227ENST00000553256 HTR3EA5X5Y0 456 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 NPIPB13A6NJU9 1138 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 NPIPB4C9JG80 1138 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 KRT33AO76009 404 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 ZNF682O95780 498 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 WNT11O96014 354 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 IFNW1P05000 195 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 PGA4P0DJD7 388 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 PGA3P0DJD8 388 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 FOSL1P15407 271 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 MAKP20794 623 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 PAX7P23759 505 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 ZNF133P52736 654 aaPredicted RBP16.78■□□□□ 0.28
PTCH1-227ENST00000553256 BIDP55957 195 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 TUBA1BP68363 451 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 TUBA4AP68366 448 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 KRT72Q14CN4 511 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 ARMC4Q5T2S8 1044 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 CARD17Q5XLA6 110 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 GLYATQ6IB77 296 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 DNM1P46Q6ZS02 220 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 TUBA1AQ71U36 451 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 RNF148Q8N7C7 305 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 MOSPD2Q8NHP6 518 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 PERPQ96FX8 193 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 SLC25A44Q96H78 314 aaPredicted RBP16.78■□□□□ 0.28
PTCH1-227ENST00000553256 SLC38A2Q96QD8 506 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 FUZQ9BT04 418 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 NDUFAF4Q9P032 175 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 MED31Q9Y3C7 131 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 ENPP4Q9Y6X5 453 aa16.78■□□□□ 0.28
PTCH1-227ENST00000553256 A0A087WUU8 490 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 DCTN3O75935 186 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 FAM107AO95990 144 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 CECR9P0C854 216 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 CBR1P16152 277 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 TTKP33981 857 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 AQP2P41181 271 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 PRKCDQ05655 676 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 DHRS1Q96LJ7 313 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 DHRS9Q9BPW9 319 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 CXorf56Q9H5V9 222 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 GLTPQ9NZD2 209 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 RHCGQ9UBD6 479 aa16.77■□□□□ 0.28
PTCH1-227ENST00000553256 ATP6V1G2-DDX39BF2Z307 99 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 GSTA4O15217 222 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 RNF13O43567 381 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 SEC14L2O76054 403 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 CELA3BP08861 270 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 T-ENOLP0DO92 83 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF26P17031 533 aaPredicted RBP16.76■□□□□ 0.27
PTCH1-227ENST00000553256 CALCRP30988 508 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 IL1RL1Q01638 556 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 MELKQ14680 651 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 TRAM2Q15035 370 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 MST1LQ2TV78 715 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 SLC22A25Q6T423 547 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 NANOGNBQ7Z5D8 188 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 YTHDF3Q7Z739 585 aaKnown RBP16.76■□□□□ 0.27
PTCH1-227ENST00000553256 NRMQ8IXM6 262 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 CIARTQ8N365 385 aaPredicted RBP16.76■□□□□ 0.27
PTCH1-227ENST00000553256 SLC7A13Q8TCU3 470 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms