RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CDHR4A6H8M9 788 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 FAM181BA6NEQ2 426 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 M0QZ24 198 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 M0R082 166 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 TPD52L2O43399 206 aaKnown RBP10.92□□□□□ -0.66
VPS29-211ENST00000553128 AHSA1O95433 338 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 RAB36O95755 333 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 HPRP00739 348 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 CBLP22681 906 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 CASQ1P31415 396 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 CRHR1P34998 444 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 CLDN8P56748 225 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 KLF3P57682 345 aaPredicted RBP10.92□□□□□ -0.66
VPS29-211ENST00000553128 C1DQ13901 141 aaKnown RBP10.92□□□□□ -0.66
VPS29-211ENST00000553128 HFEQ30201 348 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 SPRNQ5BIV9 151 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 TMEM255AQ5JRV8 349 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 LRRC74BQ6ZQY2 392 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 ZNF627Q7L945 461 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 RNF130Q86XS8 419 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 CLIP4Q8N3C7 705 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 ZNF417Q8TAU3 575 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 SYNPRQ8TBG9 265 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 STK35Q8TDR2 534 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 TIMD4Q96H15 378 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 ZNF587Q96SQ5 575 aaPredicted RBP10.92□□□□□ -0.66
VPS29-211ENST00000553128 SLC35A5Q9BS91 424 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 DPY30Q9C005 99 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 MS4A7Q9GZW8 240 aaPredicted RBP10.92□□□□□ -0.66
VPS29-211ENST00000553128 SAP30LQ9HAJ7 183 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 NPHS2Q9NP85 383 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 DECR2Q9NUI1 292 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 CHST2Q9Y4C5 530 aa10.92□□□□□ -0.66
VPS29-211ENST00000553128 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 TRIM13O60858 407 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 FZD7O75084 574 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 FOXH1O75593 365 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 TSPAN15O95858 294 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 PRB2P02812 416 aaPredicted RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 DBIP07108 87 aaKnown RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 OR8G3PP0DMU2 310 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 ZNF12P17014 697 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 GRPRP30550 384 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 CHI3L1P36222 383 aaPredicted RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 HOXC5Q00444 222 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 TEKQ02763 1124 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 MMEL1Q495T6 779 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 COX20Q5RI15 118 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 SERPINA11Q86U17 422 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 SKA3Q8IX90 412 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 NOA1Q8NC60 698 aaKnown RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 OR8J2Q8NGG1 315 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 ST7LQ8TDW4 575 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 SNX33Q8WV41 574 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 UBE2FQ969M7 185 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 TAAR8Q969N4 342 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 TRIM44Q96DX7 344 aaPredicted RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 TXNDC15Q96J42 360 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 MECRQ9BV79 373 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 MTHFD2LQ9H903 347 aaPredicted RBP10.91□□□□□ -0.66
VPS29-211ENST00000553128 TNFRSF19Q9NS68 423 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 POFUT2Q9Y2G5 429 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
VPS29-211ENST00000553128 PRSS51A0A1B0GVH4 220 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 MS4A18H0YCH9 400 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 UBOX5O94941 541 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 IGHV1-46P01743 117 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 IGHMP01871 453 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 SERPINA5P05154 406 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 LCKP06239 509 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 NCF2P19878 526 aaPredicted RBP10.9□□□□□ -0.66
VPS29-211ENST00000553128 ALDH3A1P30838 453 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 CCT5P48643 541 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 RAG2P55895 527 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 COPZ1P61923 177 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 GNA13Q14344 377 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 MS4A18Q3C1V0 323 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 OLFML2AQ68BL7 652 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 NHLRC1Q6VVB1 395 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 SYT10Q6XYQ8 523 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 Q6ZPA2 131 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 ZNF440Q8IYI8 595 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
VPS29-211ENST00000553128 ICA1LQ8NDH6 482 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 SLC30A7Q8NEW0 376 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 TUBGCP3Q96CW5 907 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 FOXB1Q99853 325 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 BEX1Q9HBH7 125 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 C1RLQ9NZP8 487 aa10.9□□□□□ -0.66
VPS29-211ENST00000553128 TESQ9UGI8 421 aaKnown RBP10.9□□□□□ -0.66
VPS29-211ENST00000553128 A0A096LPI6 279 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 AIM2O14862 343 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 TIMM23O14925 209 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 SPRY3O43610 288 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 NPHS1O60500 1241 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 UBL3O95164 117 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 NR2F1P10589 423 aa10.89□□□□□ -0.67
VPS29-211ENST00000553128 SELEP16581 610 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms