RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CDH2P19022 906 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 SLC6A2P23975 617 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 FKBP2P26885 142 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 GCH1P30793 250 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 RPL3P39023 403 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 GSK3BP49841 420 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 CCR4P51679 360 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 OR2B6P58173 313 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 MRPS11P82912 194 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 ZNF141Q15928 474 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 FBLN7Q53RD9 439 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 SAMD4BQ5PRF9 694 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 PDZK1Q5T2W1 519 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 NANOGP8Q6NSW7 305 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 MSANTD1Q6ZTZ1 278 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 DOK3Q7L591 496 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 LINGO2Q7L985 606 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 CLEC4FQ8N1N0 589 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 FAM71CQ8NEG0 241 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 JADE3Q92613 823 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 RDH5Q92781 318 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 DNAJA3Q96EY1 480 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 SDF2Q99470 211 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 PRPF18Q99633 342 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 CPPED1Q9BRF8 314 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 ACTRT3Q9BYD9 372 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 PCDHAC1Q9H158 963 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 NANOGQ9H9S0 305 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 ZMAT3Q9HA38 289 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 MOV10Q9HCE1 1003 aaKnown RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 ZNF275Q9NSD4 429 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 GPATCH2Q9NW75 528 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 SLC25A37Q9NYZ2 338 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 ABCD2Q9UBJ2 740 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 POMPQ9Y244 141 aa9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 SPIN1Q9Y657 262 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-202ENST00000552829 RYR3Q15413 4870 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 A0A0G2JMP0 313 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 CENPVL1A0A0U1RR11 272 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 A0A0X1KG70 313 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 EIF1BO60739 113 aaKnown RBP9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 SCN2BO60939 215 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 LGI1O95970 557 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 IMPDH2P12268 514 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ANPEPP15144 967 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 CBR1P16152 277 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 HOXB9P17482 250 aaPredicted RBP9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 FPR2P25090 351 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 TUBA1BP68363 451 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 TUBA4AP68366 448 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 SLC35A1P78382 337 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 LIPEQ05469 1076 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 RUNDC3AQ59EK9 446 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 LRIF1Q5T3J3 769 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ANXA8L1Q5VT79 327 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ACSM5Q6NUN0 579 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ZNF621Q6ZSS3 439 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 TUBA1AQ71U36 451 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 AAED1Q7RTV5 226 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ARPINQ7Z6K5 226 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ZNF614Q8N883 585 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 OR4M2Q8NGB6 313 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 OR8J2Q8NGG1 315 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 PSMA8Q8TAA3 256 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 PNPT1Q8TCS8 783 aaKnown RBP9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 COQ8BQ96D53 544 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 MTERF3Q96E29 417 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ZNF385AQ96PM9 386 aaKnown RBP9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 PANX1Q96RD7 426 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 PKP2Q99959 881 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 KCTD14Q9BQ13 255 aaPredicted RBP9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 IKZF5Q9H5V7 419 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ZCCHC3Q9NUD5 404 aaKnown RBP9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 ATAD3AQ9NVI7 634 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 REV1Q9UBZ9 1251 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 CD300AQ9UGN4 299 aa9.74□□□□□ -0.85
SUPT16H-202ENST00000552829 TRBV5-3A0A0A0MS03 114 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 DNAJC9-AS1A6NH13 148 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 RNASET2O00584 256 aaKnown RBP9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 MGRN1O60291 552 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 BCAS1O75363 584 aaPredicted RBP9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 ALX3O95076 343 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 MPZL1O95297 269 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 NCK1P16333 377 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 ATP6V1B2P21281 511 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 UBE2NP61088 152 aaKnown RBP9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 MS4A2Q01362 244 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 ZP4Q12836 540 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 FLOT2Q14254 428 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 PAQR6Q6TCH4 344 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 CYP2R1Q6VVX0 501 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 GRINAQ7Z429 371 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 ABHD12BQ7Z5M8 362 aaPredicted RBP9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 SPATA24Q86W54 205 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 BHLHE22Q8NFJ8 381 aaPredicted RBP9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 OR9K2Q8NGE7 335 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 OR5AK3PQ8NH89 298 aa9.73□□□□□ -0.85
SUPT16H-202ENST00000552829 ADAMTS15Q8TE58 950 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms