RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 WDSUB1Q8N9V3 476 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 OR5D13Q8NGL4 314 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 AKR7LQ8NHP1 331 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ACMSDQ8TDX5 336 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 TFB1MQ8WVM0 346 aaKnown RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 PELI1Q96FA3 418 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 OR5B2Q96R09 309 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 MAGT1Q9H0U3 335 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 C8orf33Q9H7E9 229 aaPredicted RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SGK2Q9HBY8 427 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 MEPEQ9NQ76 525 aaPredicted RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 POLE4Q9NR33 117 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SLC17A5Q9NRA2 495 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 UFSP2Q9NUQ7 469 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ETNK2Q9NVF9 386 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 UBAP1Q9NZ09 502 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SEC14L3Q9UDX4 400 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SLC2A6Q9UGQ3 507 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 LCTP09848 1927 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 BAZ2AQ9UIF9 1905 aaKnown RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 TTC41PQ6P2S7 1318 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 A0A087WYN8 130 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 G3V3Y1 287 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 EFNA2O43921 213 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 NPPAP01160 153 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF286BP0CG31 522 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 SERPINA2P20848 420 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 IDSP22304 550 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 S100A5P33763 92 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 MAP3K7CLP57077 242 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 ERVK11-1P61568 191 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 RPL8P62917 257 aaKnown RBP4.23□□□□□ -1.73
CPSF6-206ENST00000550987 RIPPLY1Q0D2K3 151 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 DOC2AQ14183 400 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 NDUFA9Q16795 377 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF613Q6PF04 617 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 METAP1DQ6UB28 335 aaPredicted RBP4.23□□□□□ -1.73
CPSF6-206ENST00000550987 UTS2BQ765I0 119 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 NLRP9Q7RTR0 991 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 CCDC65Q8IXS2 484 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 OR2T33Q8NG76 320 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 OR1F12Q8NHA8 337 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 PPTC7Q8NI37 304 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 COQ2Q96H96 371 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 PIWIL1Q96J94 861 aaKnown RBP4.23□□□□□ -1.73
CPSF6-206ENST00000550987 ARL5BQ96KC2 179 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 TCEANC2Q96MN5 208 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 CCDC77Q9BR77 488 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 TSSK1BQ9BXA7 367 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 ADNPQ9H2P0 1102 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 BOLA2Q9H3K6 86 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 NANSQ9NR45 359 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 SACSQ9NZJ4 4579 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 DYNC2H1Q8NCM8 4307 aaKnown RBP4.23□□□□□ -1.73
CPSF6-206ENST00000550987 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
CPSF6-206ENST00000550987 PRRC2AP48634 2157 aaKnown RBP4.23□□□□□ -1.73
CPSF6-206ENST00000550987 NAV1Q8NEY1 1877 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 HIVEP2P31629 2446 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 IGHV3-16A0A0C4DH30 117 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 LRP5LA4QPB2 252 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 CCT8L1PA6NM43 557 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 G3V4G9 280 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 H3BMQ9 156 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 FCMRO60667 390 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 VENTXO95231 258 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 NCK1P16333 377 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 MX1P20591 662 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 CCNE1P24864 410 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 CCT6AP40227 531 aaKnown RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 HADHBP55084 474 aaKnown RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 RPL23AP62750 156 aaKnown RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 PAX8Q06710 450 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF154Q13106 437 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 SSX2Q16385 188 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 SLC5A12Q1EHB4 618 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 TMEM52BQ4KMG9 183 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 OTUD3Q5T2D3 398 aaPredicted RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 HES3Q5TGS1 186 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 LEMD1Q68G75 181 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 ATL3Q6DD88 541 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 ADAM5Q6NVV9 412 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 FAAP20Q6NZ36 180 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 FAHD2BQ6P2I3 314 aaPredicted RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 LRRC75A-AS1Q8N1F1 130 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 DHRSXQ8N5I4 330 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 TRIML2Q8N7C3 387 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 FRAT1Q92837 279 aaPredicted RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 ZBED6CLQ96FA7 236 aaPredicted RBP4.22□□□□□ -1.73
CPSF6-206ENST00000550987 FAHD2AQ96GK7 314 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 CATSPER2Q96P56 530 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 TAAR1Q96RJ0 339 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 SPATA16Q9BXB7 569 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 HCAR1Q9BXC0 346 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 IMPAD1Q9NX62 359 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 IL36GQ9NZH8 169 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF221Q9UK13 617 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 GMEB1Q9Y692 573 aa4.22□□□□□ -1.73
CPSF6-206ENST00000550987 VWA8A3KMH1 1905 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms