RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
RAB5C-206ENST00000550406 MYO18BQ8IUG5 2567 aa11.52□□□□□ -0.57
RAB5C-206ENST00000550406 A0A1W2PRG6 482 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 NPIPB13A6NJU9 1138 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 NPIPB4C9JG80 1138 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 MITFO75030 526 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 SOX14O95416 240 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 BAG2O95816 211 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 CLDN1O95832 211 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 BCL10O95999 233 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 ANPEPP15144 967 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 GSTM3P21266 225 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 ASCL1P50553 236 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 RPL27P61353 136 aaKnown RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 COX10Q12887 443 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 RCN1Q15293 331 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 CARD17Q5XLA6 110 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 KDM4DQ6B0I6 523 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 DPY19L2P2Q6ZN68 376 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 C20orf196Q8IYI0 205 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 CLDN22Q8N7P3 220 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 FANK1Q8TC84 345 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 HDAC2Q92769 488 aaKnown RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 STMN2Q93045 179 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 TMEM54Q969K7 222 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF837Q96EG3 531 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 Q96M85 177 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 OSBPL10Q9BXB5 764 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 MRPL13Q9BYD1 178 aaKnown RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 LINC00470Q9BZP3 86 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 SLCO5A1Q9H2Y9 848 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 NKX1-2Q9UD57 310 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 IER3IP1Q9Y5U9 82 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 CDH10Q9Y6N8 788 aa11.51□□□□□ -0.57
RAB5C-206ENST00000550406 SPTBN1Q01082 2364 aaKnown RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 HELZ2Q9BYK8 2649 aaKnown RBP11.51□□□□□ -0.57
RAB5C-206ENST00000550406 PRR14LQ5THK1 2151 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF726A6NNF4 738 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 BHLHE40O14503 412 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 IMPA2O14732 288 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 SLC43A1O75387 559 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 TRMUO75648 421 aaKnown RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ACADSP16219 412 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 IGHV1-2P23083 117 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 RPL4P36578 427 aaKnown RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ACVR1BP36896 505 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ARHGDIAP52565 204 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 PPP2R2BQ00005 443 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 TAF11Q15544 211 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 HIST3H3Q16695 136 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 FBXW9Q5XUX1 488 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 LRFN4Q6PJG9 635 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 Q6ZT83 130 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 CXorf67Q86X51 503 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ZDHHC13Q8IUH4 622 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 OR4Q3Q8NH05 313 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 RASD2Q96D21 266 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 NMD3Q96D46 503 aaKnown RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 SLC25A44Q96H78 314 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 LRR1Q96L50 414 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 ADAD1Q96M93 576 aaKnown RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 SLC29A1Q99808 456 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 CIB1Q99828 191 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 RBM24Q9BX46 236 aaKnown RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 POLDIP3Q9BY77 421 aaKnown RBP11.5□□□□□ -0.57
RAB5C-206ENST00000550406 GALNT8Q9NY28 637 aa11.5□□□□□ -0.57
RAB5C-206ENST00000550406 SOCS2O14508 198 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 ARPC3O15145 178 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 CNOT4O95628 575 aaKnown RBP11.49□□□□□ -0.57
RAB5C-206ENST00000550406 TXNDC12O95881 172 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 ITGA5P08648 1049 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 OSMP13725 252 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 SLC6A6P31641 620 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 CCKARP32238 428 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 CD79BP40259 229 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 DAP3P51398 398 aaKnown RBP11.49□□□□□ -0.57
RAB5C-206ENST00000550406 FAPQ12884 760 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 TSC22D1Q15714 1073 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 SLC36A3Q495N2 470 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 MESTQ5EB52 335 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 CLEC12AQ5QGZ9 265 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF362Q5T0B9 420 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-206ENST00000550406 ACSM5Q6NUN0 579 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 STAC2Q6ZMT1 411 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 BEND4Q6ZU67 534 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 PTCHD4Q6ZW05 846 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 ARIH2OSQ8N7S6 290 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 POMGNT2Q8NAT1 580 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 RNASE6Q93091 150 aaKnown RBP11.49□□□□□ -0.57
RAB5C-206ENST00000550406 ERMAPQ96PL5 475 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-206ENST00000550406 PSMG3-AS1Q96PY0 264 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms