RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 HOPXQ9BPY8 73 aaPredicted RBP8.52□□□□□ -1.05
HDAC7-229ENST00000549883 KCTD14Q9BQ13 255 aaPredicted RBP8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF224Q9NZL3 707 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 POU2F3Q9UKI9 436 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 NOX1Q9Y5S8 564 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ATP23Q9Y6H3 246 aa8.52□□□□□ -1.05
HDAC7-229ENST00000549883 ARPC4-TTLL3A0A0A6YYG9 625 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 OR6C65A6NJZ3 312 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 BLOC1S5-TXNDC5H3BN57 136 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 SMAD7O15105 426 aaKnown RBP8.51□□□□□ -1.05
HDAC7-229ENST00000549883 RNF13O43567 381 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 IFNA14P01570 189 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 IGHV4-39P01824 125 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 HLA-HP01893 362 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 CECR9P0C854 216 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 PATE4P0C8F1 98 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 B4GALT1P15291 398 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 PAX1P15863 534 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 TCN1P20061 433 aaPredicted RBP8.51□□□□□ -1.05
HDAC7-229ENST00000549883 PRDX6P30041 224 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 TTKP33981 857 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 MYBPC1Q00872 1141 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 FHL1Q13642 323 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 IFI44LQ53G44 452 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 C11orf71Q6IPW1 123 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 LRFN4Q6PJG9 635 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 NANOGNBQ7Z5D8 188 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 DTX2Q86UW9 622 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 MDP1Q86V88 176 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 OR6N1Q8NGY5 312 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 TMEM54Q969K7 222 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 CMTM5Q96DZ9 223 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 SGTBQ96EQ0 304 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 MS4A3Q96HJ5 214 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 PRRC1Q96M27 445 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 SLC38A2Q96QD8 506 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 DHRS9Q9BPW9 319 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 SLC19A3Q9BZV2 496 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
HDAC7-229ENST00000549883 CXorf56Q9H5V9 222 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 ADA2Q9NZK5 511 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 CRNNQ9UBG3 495 aaPredicted RBP8.51□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF229Q9UJW7 825 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 ARL2BPQ9Y2Y0 163 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 V9GYQ6 96 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 C2CD3Q4AC94 2353 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 YLPM1P49750 1951 aaKnown RBP8.51□□□□□ -1.05
HDAC7-229ENST00000549883 CSPG4Q6UVK1 2322 aa8.51□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF726A6NNF4 738 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF99A8MXY4 864 aaPredicted RBP8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ARHGEF9O43307 516 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 DIRAS1O95057 198 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 OR6A2O95222 327 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 WNT11O96014 354 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 IGLV1-44P01699 117 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 TSPAN19P0C672 248 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 IFI30P13284 250 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF26P17031 533 aaPredicted RBP8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ACVR1BP36896 505 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 RBM34P42696 430 aaKnown RBP8.5□□□□□ -1.05
HDAC7-229ENST00000549883 CSNK1A1P48729 337 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 FABP6P51161 128 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 IDH3GP51553 393 aaPredicted RBP8.5□□□□□ -1.05
HDAC7-229ENST00000549883 UBE2NP61088 152 aaKnown RBP8.5□□□□□ -1.05
HDAC7-229ENST00000549883 NAAAQ02083 359 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 HGFACQ04756 655 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 PIGFQ07326 219 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 NPRL3Q12980 569 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 TNK1Q13470 666 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 MST1LQ2TV78 715 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 GLYATQ6IB77 296 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 FKBP9P1Q75LS8 142 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 IGFN1Q86VF2 1251 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 NRMQ8IXM6 262 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 OFCC1Q8IZS5 231 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 CLDN22Q8N7P3 220 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 OR6X1Q8NH79 312 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 MAGEE2Q8TD90 523 aaPredicted RBP8.5□□□□□ -1.05
HDAC7-229ENST00000549883 FAM162AQ96A26 154 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 C18orf12Q96KH6 178 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 LRR1Q96L50 414 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF75AQ96N20 296 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ZNF347Q96SE7 839 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 CCT8L2Q96SF2 557 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 CACNG6Q9BXT2 260 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 ULBP2Q9BZM5 246 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 SPAG4Q9NPE6 437 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 B3GNT2Q9NY97 397 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 GLTPQ9NZD2 209 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 AP3M1Q9Y2T2 418 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 MED31Q9Y3C7 131 aa8.5□□□□□ -1.05
HDAC7-229ENST00000549883 VPS13CQ709C8 3753 aa8.49□□□□□ -1.05
HDAC7-229ENST00000549883 TRAV27A0A087WT01 109 aa8.49□□□□□ -1.05
HDAC7-229ENST00000549883 A0A087WUU8 490 aa8.49□□□□□ -1.05
HDAC7-229ENST00000549883 IGKV1D-43A0A0B4J1Z2 117 aa8.49□□□□□ -1.05
HDAC7-229ENST00000549883 hCG_2039718K7EN88 272 aa8.49□□□□□ -1.05
HDAC7-229ENST00000549883 DYNC1I1O14576 645 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms