RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, human

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCHP-208	ENST00000549550	BCO1	Q9HAY6	547 aa		13.64	□□□□□ -0.23
TCHP-208	ENST00000549550	UBQLN4	Q9NRR5	601 aa		13.64	□□□□□ -0.23
TCHP-208	ENST00000549550	ACER3	Q9NUN7	267 aa		13.64	□□□□□ -0.23
TCHP-208	ENST00000549550	TES	Q9UGI8	421 aa	Known RBP	13.64	□□□□□ -0.23
TCHP-208	ENST00000549550	MKLN1	Q9UL63	735 aa		13.64	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC35A3	Q9Y2D2	325 aa		13.64	□□□□□ -0.23
TCHP-208	ENST00000549550	GJE1	A6NN92	205 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	PDLIM1	O00151	329 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	SCD	O00767	359 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	OR5F1	O95221	314 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	IGHV1-2	P23083	117 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	EDNRA	P25101	427 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	IFNGR2	P38484	337 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	CAPG	P40121	348 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	RGS8	P57771	180 aa	Predicted RBP	13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	SPOCK1	Q08629	439 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	ST3GAL3	Q11203	375 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	GPR68	Q15743	365 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	SWT1	Q5T5J6	900 aa	Known RBP	13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	KDM4D	Q6B0I6	523 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC22A25	Q6T423	547 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	FBXL14	Q8N1E6	418 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC43A2	Q8N370	569 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	MUC15	Q8N387	334 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	ZNF555	Q8NEP9	628 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	ATP6V1C2	Q8NEY4	427 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	ADI1	Q9BV57	179 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	FNDC11	Q9BVV2	318 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	ZNF556	Q9HAH1	456 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	KIF17	Q9P2E2	1029 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	KLHL9	Q9P2J3	617 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	ING1	Q9UK53	422 aa	Predicted RBP	13.63	□□□□□ -0.23
TCHP-208	ENST00000549550	POU2F3	Q9UKI9	436 aa		13.63	□□□□□ -0.23
TCHP-208	ENST00000549550		A0A1W2PQD3	144 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC35F4	A4IF30	521 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550		H7C417	338 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	CCNB2	O95067	398 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	NUDT14	O95848	222 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	COX5A	P20674	150 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	USF1	P22415	310 aa	Predicted RBP	13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	CDH12	P55289	794 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	LSM11	P83369	360 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	3e-6	■■■■■ 27
TCHP-208	ENST00000549550	ZNF117	Q03924	483 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC36A3	Q495N2	470 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	FAM120AOS	Q5T036	256 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	TMEM108	Q6UXF1	575 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	ZNF836	Q6ZNA1	936 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	SSX8	Q7RTT4	187 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	P2RY8	Q86VZ1	359 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	VRK2	Q86Y07	508 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	PARP8	Q8N3A8	854 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	ZNF775	Q96BV0	537 aa	Predicted RBP	13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	ZNF570	Q96NI8	536 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	EXOSC3	Q9NQT5	275 aa	Known RBP	13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	PDP1	Q9P0J1	537 aa	Predicted RBP	13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	KCNS2	Q9ULS6	477 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	MGAT4B	Q9UQ53	548 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	POFUT2	Q9Y2G5	429 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	HSPE1-MOB4	S4R3N1	261 aa		13.62	□□□□□ -0.23
TCHP-208	ENST00000549550	HTR3E	A5X5Y0	456 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	OR5H1	A6NKK0	313 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550		H3BNH8	94 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	DLGAP1	O14490	977 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC16A6	O15403	523 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	OIP5	O43482	229 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	MYF6	P23409	242 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	GZMK	P49863	264 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	FABP6	P51161	128 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	RASGEF1B	Q0VAM2	473 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	COX10	Q12887	443 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	TRAM2	Q15035	370 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	CCNJ	Q5T5M9	372 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	MRPL2	Q5T653	305 aa	Known RBP	13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	FAM166A	Q6J272	317 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	CBLN3	Q6UW01	205 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	B3GLCT	Q6Y288	498 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	DEF8	Q6ZN54	512 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	ATG16L2	Q8NAA4	619 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	OR10G2	Q8NGC3	310 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	OR6T1	Q8NGN1	323 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	PHOSPHO1	Q8TCT1	267 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	SLC38A4	Q969I6	547 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	KRT84	Q9NSB2	600 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	VNN3	Q9NY84	501 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550	A4GNT	Q9UNA3	340 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550		U3KQV3	271 aa		13.61	□□□□□ -0.23
TCHP-208	ENST00000549550		A0A1W2PNR3	127 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	FFAR1	O14842	300 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	WIPF1	O43516	503 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	RAD51D	O75771	328 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	LY6H	O94772	140 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	CSF3	P09919	207 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	TNFRSF1B	P20333	461 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	PTAFR	P25105	342 aa		13.6	□□□□□ -0.23
TCHP-208	ENST00000549550	RNF144A	P50876	292 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms