RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 OR5M10Q6IEU7 315 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF677Q86XU0 584 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF683Q8IZ20 524 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 DEFB119Q8N690 84 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 TMEM161BQ8NDZ6 487 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 OR5L2Q8NGL0 311 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 OR2A12Q8NGT7 310 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ZPLD1Q8TCW7 415 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 SCFD1Q8WVM8 642 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 HAVCR1Q96D42 359 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 OTUB2Q96DC9 234 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PELI1Q96FA3 418 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 XPO6Q96QU8 1125 aaKnown RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 CYP2S1Q96SQ9 504 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ANP32EQ9BTT0 268 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PARVGQ9HBI0 331 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PAK1IP1Q9NWT1 392 aaPredicted RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PIPOXQ9P0Z9 390 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 DEC1Q9P2X7 70 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ABCD2Q9UBJ2 740 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 RNF14Q9UBS8 474 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 SNX6Q9UNH7 406 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PDE10AQ9Y233 779 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 FLVCR1Q9Y5Y0 555 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 SMAD5-AS1Q9Y6J3 95 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 CFAP54Q96N23 3096 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 A0A1B0GVY2 172 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 A0A1B0GWB2 263 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 G3V4G9 280 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SGK1O00141 431 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 AP3B1O00203 1094 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 ZNF254O75437 659 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SERF1AO75920 110 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CTDNEP1O95476 244 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 TNNC2P02585 160 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 UGT2B4P06133 528 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CAPN1P07384 714 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 IGLL1P15814 213 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SERPINA2P20848 420 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 ADORA2BP29275 332 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 OPRD1P41143 372 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 P2RY1P47900 373 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 ACOT2P49753 483 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 IGLV3-21P80748 117 aaPredicted RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SLC7A9P82251 487 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 OTUD4Q01804 1114 aaKnown RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 RIPK1Q13546 671 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 MESDQ14696 234 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CCDC183Q5T5S1 534 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SDHAF4Q5VUM1 108 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 C16orf62Q7Z3J2 963 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 TMEM150AQ86TG1 271 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 UBQLNLQ8IYU4 475 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 DAW1Q8N136 415 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CADM2Q8N3J6 435 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 PDCL2Q8N4E4 241 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CSGALNACT2Q8N6G5 542 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 LRRC52Q8N7C0 313 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 NECAB1Q8N987 351 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CTNNBL1Q8WYA6 563 aaPredicted RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 PIGCQ92535 297 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SH3YL1Q96HL8 342 aaPredicted RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 ANKRD36BP1Q96IX9 119 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 NOL4LQ96MY1 436 aaPredicted RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 TTC25Q96NG3 672 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 PLIN2Q99541 437 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 LLPHQ9BRT6 129 aaKnown RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 NIPSNAP3BQ9BS92 247 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 SLITRK2Q9H156 845 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 LINC00597Q9H2U6 94 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 TMEM9Q9P0T7 183 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 OR1A1Q9P1Q5 309 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 ONECUT1Q9UBC0 465 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 RABL2AQ9UBK7 228 aaPredicted RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 KLHL21Q9UJP4 597 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 LSM7Q9UK45 103 aaKnown RBP2.96□□□□□ -1.94
PTCH1-216ENST00000548379 CDH9Q9ULB4 789 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 DMDP11532 3685 aa2.96□□□□□ -1.94
PTCH1-216ENST00000548379 NCOR1O75376 2440 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 MYH7P12883 1935 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 PLXNA4Q9HCM2 1894 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 IGHV1OR15-9A0A0B4J2B8 117 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 DHRS7CA6NNS2 312 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 H3BQV1 296 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 J3QKU1 62 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 WWP2O00308 870 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 DFNA5O60443 496 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 UGT2B17O75795 530 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SEMG1P04279 462 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 SFTPCP11686 197 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 GABRG2P18507 467 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 MMP11P24347 488 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 HNRNPA3P51991 378 aaKnown RBP2.95□□□□□ -1.94
PTCH1-216ENST00000548379 C21orf59P57076 290 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 TNNC1P63316 161 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 GTF2BQ00403 316 aa2.95□□□□□ -1.94
PTCH1-216ENST00000548379 IL24Q13007 206 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms