RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ARPC3O15145 178 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 HCRTR2O43614 444 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 NOL3O60936 208 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 CCL3P10147 92 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PIPP12273 146 aaPredicted RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 APEHP13798 732 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 UQCRC1P31930 480 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 APOBEC1P41238 236 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 EIF1P41567 113 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 IDH2P48735 452 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 POLR2HP52434 150 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 ERVFRD-1P60508 538 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 CDC42P60953 191 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 SLC35A2P78381 396 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 S100A12P80511 92 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 TOP3AQ13472 1001 aaPredicted RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 ZNF74Q16587 644 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 HYAL4Q2M3T9 481 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 ZIK1Q3SY52 487 aaPredicted RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 PLEKHN1Q494U1 663 aaPredicted RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 C6orf141Q5SZD1 244 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 SLC22A10Q63ZE4 541 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 SLC51BQ86UW2 128 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 ADGRG3Q86Y34 549 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PLCZ1Q86YW0 608 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 CADM3Q8N126 398 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 MDS2Q8NDY4 140 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 OR8J1Q8NGP2 316 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PFN4Q8NHR9 129 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 OSTF1Q92882 214 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 ZBTB8AQ96BR9 441 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PTDSS2Q9BVG9 487 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PRRG3Q9BZD7 231 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PLA2G12AQ9BZM1 189 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 UBQLN3Q9H347 655 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 FN3KQ9H479 309 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 RIBC2Q9H4K1 309 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 DUSP21Q9H596 190 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 CDCP1Q9H5V8 836 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 FKRPQ9H9S5 495 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 GALNT9Q9HCQ5 603 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 CTPS2Q9NRF8 586 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 MRPS18AQ9NVS2 196 aaKnown RBP7.59□□□□□ -1.19
VPS29-203ENST00000546588 ZNF226Q9NYT6 803 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 PPP4R1LQ9P1A2 415 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 RPS6KB2Q9UBS0 482 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 ZNF229Q9UJW7 825 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 RNF6Q9Y252 685 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 MYRFQ9Y2G1 1151 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 GPR52Q9Y2T5 361 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 SESN1Q9Y6P5 492 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 CUL9Q8IWT3 2517 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 AHCTF1Q8WYP5 2266 aa7.59□□□□□ -1.19
VPS29-203ENST00000546588 ZFHX4Q86UP3 3567 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 ZNF503-AS2A6NEH8 195 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 UNC119BA6NIH7 251 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 SNTNA6NMZ2 147 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 A8MVM7 634 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 SCO2O43819 266 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 HCN1O60741 890 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 PFDN1O60925 122 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 NEURL1O76050 574 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 OR7A10O76100 309 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 RCBTB2O95199 551 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 TXNDC12O95881 172 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 IGHMP01871 453 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 BGLAPP02818 100 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 IFI30P13284 250 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 PRKACAP17612 351 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 TACR3P29371 465 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 GRK5P34947 590 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 GDI2P50395 445 aaKnown RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 SMSP52788 366 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 PRPS1P60891 318 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 CDC20Q12834 499 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 TOMM34Q15785 309 aaPredicted RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 ZBED5Q49AG3 693 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 FAM69AQ5T7M9 428 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 MEDAGQ5VYS4 303 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 RNLSQ5VYX0 342 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 SLC27A4Q6P1M0 643 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 WDR73Q6P4I2 378 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 SMARCD3Q6STE5 483 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 ASB18Q6ZVZ8 466 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 RRM2BQ7LG56 351 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 ZNF554Q86TJ5 538 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 GLB1L2Q8IW92 636 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 CDK20Q8IZL9 346 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 CYP4Z2PQ8N1L4 340 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 GTPBP8Q8N3Z3 284 aaPredicted RBP7.58□□□□□ -1.2
VPS29-203ENST00000546588 LRRC75AQ8NAA5 344 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 GATSQ8NAP1 163 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 CLEC1AQ8NC01 280 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 ADPRHL1Q8NDY3 354 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 OR2T33Q8NG76 320 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 TEX47Q8TBZ9 253 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 POC1BQ8TC44 478 aa7.58□□□□□ -1.2
VPS29-203ENST00000546588 DUSP19Q8WTR2 217 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms