RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 SLC7A10Q9NS82 523 aa14.4□□□□□ -0.1
LIMS2-217ENST00000545738 EMC3Q9P0I2 261 aa14.4□□□□□ -0.1
LIMS2-217ENST00000545738 ZNF346Q9UL40 294 aaKnown RBP14.4□□□□□ -0.1
LIMS2-217ENST00000545738 RRP15Q9Y3B9 282 aaKnown RBP14.4□□□□□ -0.1
LIMS2-217ENST00000545738 DOPEY2Q9Y3R5 2298 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 EEF1E1-BLOC1S5C9J1V9 151 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 GPR171O14626 319 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 EEF1E1O43324 174 aaKnown RBP14.39□□□□□ -0.11
LIMS2-217ENST00000545738 UPK3AO75631 287 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 PPP1R3DO95685 299 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 IGHMP01871 453 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 CD8BP10966 210 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 PEX2P28328 305 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 OPRM1P35372 400 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 POLR2IP36954 125 aaKnown RBP14.39□□□□□ -0.11
LIMS2-217ENST00000545738 PRPS1P60891 318 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 CARD17Q5XLA6 110 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 LPCAT4Q643R3 524 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 AAED1Q7RTV5 226 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 CBR4Q8N4T8 237 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 IQCF1Q8N6M8 205 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF519Q8TB69 540 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 RASD2Q96D21 266 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF837Q96EG3 531 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-217ENST00000545738 OSBPL10Q9BXB5 764 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 STX18Q9P2W9 335 aaKnown RBP14.39□□□□□ -0.11
LIMS2-217ENST00000545738 FOXD3Q9UJU5 478 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-217ENST00000545738 ICE1Q9Y2F5 2266 aa14.39□□□□□ -0.11
LIMS2-217ENST00000545738 A8MXE2 369 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 BHLHE40O14503 412 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 DVL2O14641 736 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 MGRN1O60291 552 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 MRPL33O75394 65 aaKnown RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 ALPLP05186 524 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 CD14P08571 375 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 ANXA8P13928 327 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 ANKDD1AQ495B1 522 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 MESTQ5EB52 335 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 MTFR2Q6P444 385 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 FAM26EQ8N5C1 309 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 HDAC2Q92769 488 aaKnown RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 ALKBH3Q96Q83 286 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 POLDIP3Q9BY77 421 aaKnown RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 TXNIPQ9H3M7 391 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 COQ3Q9NZJ6 369 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 PROCRQ9UNN8 238 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 IGKV1D-43A0A0B4J1Z2 117 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 TEX13CA0A0J9YWL9 993 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 H7C1C5 153 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 PGA4P0DJD7 388 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 PGA3P0DJD8 388 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 CCKARP32238 428 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 RPL4P36578 427 aaKnown RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 ARHGDIAP52565 204 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 LCN6P62502 163 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 LRRC36Q1X8D7 754 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 PTCHD4Q6ZW05 846 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 GABRG1Q8N1C3 465 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF808Q8N4W9 903 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 CA5BP1Q8WTZ4 195 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 NRG4Q8WWG1 115 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 APH1AQ96BI3 265 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 MRPL13Q9BYD1 178 aaKnown RBP14.38□□□□□ -0.11
LIMS2-217ENST00000545738 DCLRE1BQ9H816 532 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 RNPEPL1Q9HAU8 725 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 KIF17Q9P2E2 1029 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 RCE1Q9Y256 329 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 IER3IP1Q9Y5U9 82 aa14.38□□□□□ -0.11
LIMS2-217ENST00000545738 A0A1W2PRG6 482 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 NPIPB13A6NJU9 1138 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 NPIPB4C9JG80 1138 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 DLGAP1O14490 977 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 BCL10O95999 233 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 OSMP13725 252 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 GSTM3P21266 225 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 SMSP52788 366 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 RPL27P61353 136 aaKnown RBP14.37□□□□□ -0.11
LIMS2-217ENST00000545738 COX10Q12887 443 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 TSC22D1Q15714 1073 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF362Q5T0B9 420 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-217ENST00000545738 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 DPY19L2P2Q6ZN68 376 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 OR6X1Q8NH79 312 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 NPDC1Q9NQX5 325 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-217ENST00000545738 PAPOLBQ9NRJ5 636 aaKnown RBP14.37□□□□□ -0.11
LIMS2-217ENST00000545738 MALT1Q9UDY8 824 aa14.37□□□□□ -0.11
LIMS2-217ENST00000545738 H0YHG0 523 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 C19orf84I3L1E1 186 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 MSTNO14793 375 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 TRMUO75648 421 aaKnown RBP14.36□□□□□ -0.11
LIMS2-217ENST00000545738 FMODQ06828 376 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 FAM27E3Q08E93 113 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 SNTB1Q13884 538 aaKnown RBP14.36□□□□□ -0.11
LIMS2-217ENST00000545738 DAG1Q14118 895 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 TRIP10Q15642 601 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 ACSM5Q6NUN0 579 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 C22orf34Q6ZV56 151 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 C20orf196Q8IYI0 205 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 ZNF100Q8IYN0 542 aa14.36□□□□□ -0.11
LIMS2-217ENST00000545738 PARP8Q8N3A8 854 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms