RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 B3GNT2Q9NY97 397 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SSTR2P30874 369 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 PLA2G7Q13093 441 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 MLF2Q15773 248 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 C11orf91Q3C1V1 193 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF385BQ569K4 471 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CPT1CQ8TCG5 803 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 UPRTQ96BW1 309 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 ZIC5Q96T25 663 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 RPS10P5Q9NQ39 176 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 TM7SF3Q9NS93 570 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 PRAMEF27A3QJZ7 478 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 FABP7O15540 132 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 DDAH2O95865 285 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CHRM4P08173 479 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 MAKP20794 623 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 RPL27P61353 136 aaKnown RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 GABREP78334 506 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 CDKN3Q16667 212 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 AADACL4Q5VUY2 407 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 PRAMEF9Q5VWM5 478 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 SLC35D2Q76EJ3 337 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 LIMS2Q7Z4I7 341 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 DYNC2LI1Q8TCX1 351 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 MBNL1Q9NR56 388 aaKnown RBP11.54□□□□□ -0.56
COL4A6-209ENST00000545689 OR52A1Q9UKL2 312 aa11.54□□□□□ -0.56
COL4A6-209ENST00000545689 A0A1W2PR48 441 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 K7EPK0 472 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 CHRM2P08172 466 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 CLEC2LP0C7M8 214 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 CD46P15529 392 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ETV5P41161 510 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ETV1P50549 477 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 P2RX1P51575 399 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 EXT1Q16394 746 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SLC36A2Q495M3 483 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 LANCL3Q6ZV70 420 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SLC51BQ86UW2 128 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 FAM71E2Q8N5Q1 922 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SLC35A4Q96G79 324 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 MOB1AQ9H8S9 216 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 LRP5LA4QPB2 252 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 H3BQ06 376 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 FXYD1O00168 92 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF254O75437 659 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 FUCA1P04066 466 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 BSGP35613 385 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 CCR5P51681 352 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF750Q32MQ0 723 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 DCAF12Q5T6F0 453 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 AAED1Q7RTV5 226 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PSMF1Q92530 271 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 GALNT9Q9HCQ5 603 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SERTM1A2A2V5 107 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 H7C1C5 153 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 TSPAN12O95859 305 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ALDH3B1P43353 468 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PGFP49763 221 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 BIDP55957 195 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 LCN6P62502 163 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 C14orf28Q4W4Y0 310 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 H1FNTQ75WM6 255 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PFN4Q8NHR9 129 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 GPR160Q9UJ42 338 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 A0A087WUU8 490 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 MTCP1P56278 107 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 MFAP5Q13361 173 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 OR1E3Q8WZA6 343 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PIGCQ92535 297 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 FAM212BQ9NTI7 297 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ACAD8Q9UKU7 415 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ASB1Q9Y576 335 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 A0A1B0GTW7 788 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PRAMEF25A6NGN4 478 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF780AO75290 641 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ACTL6BO94805 426 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 KCNK2O95069 426 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SOD1P00441 154 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 DBHP09172 617 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 ELK1P19419 428 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SEC61A1P61619 476 aaKnown RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 NKX6-1P78426 367 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 SLC14A1Q13336 389 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 FCN2Q15485 313 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 MEP1BQ16820 701 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 WDR5BQ86VZ2 330 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PTOV1Q86YD1 416 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 NKAIN4Q8IVV8 208 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 OR13H1Q8NG92 308 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 RADILQ96JH8 1075 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 PKMYT1Q99640 499 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 NXF5Q9H1B4 397 aaKnown RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM100Q9NV29 134 aa11.53□□□□□ -0.56
COL4A6-209ENST00000545689 TP53TG5Q9Y2B4 290 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms