RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CHI3L2Q15782 390 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 COX20Q5RI15 118 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 RGS7BPQ6MZT1 257 aaPredicted RBP12.5□□□□□ -0.41
RTN3-214ENST00000545432 WDFY1Q8IWB7 410 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 IFT20Q8IY31 132 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 MNS1Q8NEH6 495 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 FGFBP3Q8TAT2 258 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 RAB1CQ92928 201 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 TAAR8Q969N4 342 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
RTN3-214ENST00000545432 FOXB1Q99853 325 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 SPATA9Q9BWV2 254 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 SLCO1C1Q9NYB5 712 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 ZNF69Q9UC07 566 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 LEF1Q9UJU2 399 aaPredicted RBP12.5□□□□□ -0.41
RTN3-214ENST00000545432 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
RTN3-214ENST00000545432 A0A1W2PPW3 197 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 CCDC154A6NI56 674 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 CLDN25C9JDP6 229 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 SNAP29O95721 258 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 HPRP00739 348 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 PTDSS1P48651 473 aaKnown RBP12.49□□□□□ -0.41
RTN3-214ENST00000545432 AQP5P55064 265 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 RAB39AQ14964 217 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 FAM209AQ5JX71 171 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 PIWIL3Q7Z3Z3 882 aaKnown RBP12.49□□□□□ -0.41
RTN3-214ENST00000545432 TREML1Q86YW5 311 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 TRIML2Q8N7C3 387 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 LSMEM1Q8N8F7 131 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 ZNF519Q8TB69 540 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 PNPT1Q8TCS8 783 aaKnown RBP12.49□□□□□ -0.41
RTN3-214ENST00000545432 MGARPQ8TDB4 240 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 APOPT1Q96IL0 206 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 TSPAN32Q96QS1 320 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 TCF7L2Q9NQB0 619 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 SLC17A7Q9P2U7 560 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 ZNF443Q9Y2A4 671 aaPredicted RBP12.49□□□□□ -0.41
RTN3-214ENST00000545432 POFUT2Q9Y2G5 429 aa12.49□□□□□ -0.41
RTN3-214ENST00000545432 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 E9PBE3 544 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 RAB36O95755 333 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 ADH4P08319 380 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 HLA-DOBP13765 273 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 GRPRP30550 384 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 ATP4BP51164 291 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 CLNS1AP54105 237 aaKnown RBP12.48□□□□□ -0.41
RTN3-214ENST00000545432 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
RTN3-214ENST00000545432 SELENOVP59797 346 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 LRRC74AQ0VAA2 488 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 NKPD1Q17RQ9 610 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 ATG16L1Q676U5 607 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 C9orf139Q6ZV77 190 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 USP51Q70EK9 711 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 SERPINA11Q86U17 422 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 SNX32Q86XE0 403 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 GSPT2Q8IYD1 628 aaKnown RBP12.48□□□□□ -0.41
RTN3-214ENST00000545432 BCL6BQ8N143 479 aaPredicted RBP12.48□□□□□ -0.41
RTN3-214ENST00000545432 SYNPRQ8TBG9 265 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 TEX37Q96LM6 180 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 CALML5Q9NZT1 146 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 CACNG2Q9Y698 323 aa12.48□□□□□ -0.41
RTN3-214ENST00000545432 A0A1B0GUS0 222 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 FOXH1O75593 365 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 UBOX5O94941 541 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 MFN2O95140 757 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 IGHV3-13P01766 116 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 B4GALT1P15291 398 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 ZNF12P17014 697 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 NCF2P19878 526 aaPredicted RBP12.47□□□□□ -0.41
RTN3-214ENST00000545432 GTF2E2P29084 291 aaKnown RBP12.47□□□□□ -0.41
RTN3-214ENST00000545432 S100A3P33764 101 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 CDKN2CP42773 168 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 RAD52P43351 418 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 BAMBIQ13145 260 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 CAMK2DQ13557 499 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 LARS2Q15031 903 aaKnown RBP12.47□□□□□ -0.41
RTN3-214ENST00000545432 MOGQ16653 247 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 HFEQ30201 348 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 UEVLDQ8IX04 471 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 PAQR4Q8N4S7 273 aaPredicted RBP12.47□□□□□ -0.41
RTN3-214ENST00000545432 SCAIQ8N9R8 606 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 SLC38A4Q969I6 547 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 TXNDC15Q96J42 360 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 DUX5Q96PT3 197 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 EMC6Q9BV81 110 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 RSPO3Q9BXY4 272 aaPredicted RBP12.47□□□□□ -0.41
RTN3-214ENST00000545432 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 MMP26Q9NRE1 261 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 PURGQ9UJV8 347 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms