RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SLC22A23A1A5C7 686 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 C3orf84H3BNL1 204 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 OR7A17O14581 309 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 DNALI1O14645 258 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF264O43296 627 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TRAF3IP2O43734 574 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 EIF4E2O60573 245 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 BANF1O75531 89 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SKAP2O75563 359 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 H6PDO95479 791 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 IGHMP01871 453 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CSTBP04080 98 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TFPIP10646 304 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF20P17024 532 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TCN1P20061 433 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CRABP2P29373 138 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 GLRXP35754 106 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 APOBEC1P41238 236 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MAP3K8P41279 467 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CRYBB2P43320 205 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 ALDH3B1P43353 468 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 FNTAP49354 379 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 PROK1P58294 105 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SLC35A1P78382 337 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 LCN2P80188 198 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MERTKQ12866 999 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 QPRTQ15274 297 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 PPP1R7Q15435 360 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 FAM83EQ2M2I3 478 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SPATS1Q496A3 300 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 GLIPR1L2Q4G1C9 344 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 C4orf46Q504U0 113 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SGO1Q5FBB7 561 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SPDYAQ5MJ70 313 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 AVPI1Q5T686 147 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 GKAP1Q5VSY0 366 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 KRT80Q6KB66 452 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 C11orf87Q6NUJ2 197 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 KLC3Q6P597 504 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM154Q6P9G4 183 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CCDC137Q6PK04 289 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CBLN3Q6UW01 205 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 AAED1Q7RTV5 226 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 ZBED8Q8IZ13 594 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 PARP8Q8N3A8 854 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TMCO5AQ8N6Q1 288 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 COX18Q8N8Q8 333 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 ANKRD42Q8N9B4 389 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SLC16A11Q8NCK7 471 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CPEB3Q8NE35 698 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 LINC01006Q8NI28 216 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MGARPQ8TDB4 240 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 DYRK2Q92630 601 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TAF15Q92804 592 aaKnown RBP eCLIP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MUL1Q969V5 352 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SLC47A1Q96FL8 570 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 FAM71F1Q96KD3 344 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MS4A4EQ96PG1 132 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 GPR22Q99680 433 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CPNE1Q99829 537 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 SF3B5Q9BWJ5 86 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MRPL37Q9BZE1 423 aaKnown RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 LAT2Q9GZY6 243 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 GLIPR2Q9H4G4 154 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 PRDM13Q9H4Q3 707 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 NOX3Q9HBY0 568 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CRLF2Q9HC73 371 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 EQTNQ9NQ60 294 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 MIEF1Q9NQG6 463 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 NKIRAS2Q9NYR9 191 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TAS2R7Q9NYW3 318 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 GRHL1Q9NZI5 618 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 IL20RAQ9UHF4 553 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 LEF1Q9UJU2 399 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TMCO1Q9UM00 188 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CHMP2BQ9UQN3 213 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TRAPPC4Q9Y296 219 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 CARD8Q9Y2G2 431 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 WIPI2Q9Y4P8 454 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 FLVCR1Q9Y5Y0 555 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 POMT1Q9Y6A1 747 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 TEX264Q9Y6I9 313 aa3.45□□□□□ -1.86
SNHG1-220ENST00000544550 DSPPQ9NZW4 1301 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TRGV11A0A075B6L2 103 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ISPDA4D126 451 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 C17orf100A8MU93 164 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 STX16-NPEPL1H3BU86 382 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 STX16O14662 325 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SPDEFO95238 335 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 LGI1O95970 557 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 OTCP00480 354 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 PDYNP01213 254 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KRT6AP02538 564 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 KRT6BP04259 564 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SFTPBP07988 381 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 UBL4AP11441 157 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF12P17014 697 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 TSPAN8P19075 237 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 CPT2P23786 658 aa3.44□□□□□ -1.86
SNHG1-220ENST00000544550 SPRP35270 261 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms