RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 CBFBQ13951 182 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 Q5BKY6 102 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 PRSS45Q7RTY3 260 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 PM20D2Q8IYS1 436 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 KLHL15Q96M94 604 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 MNTQ99583 582 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 NUDT15Q9NV35 164 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 CTSFQ9UBX1 484 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 V9GY05 133 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 UNC13CQ8NB66 2214 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 C11orf98E9PRG8 122 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 SCO2O43819 266 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 FADS1O60427 444 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 SLC25A12O75746 678 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 C1QBP02746 253 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 ALOX5APP20292 161 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 DPP4P27487 766 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 ERP29P30040 261 aaKnown RBP16.31■□□□□ 0.2
VIM-209ENST00000544301 EVI2BP34910 448 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 GZMKP49863 264 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 FAPQ12884 760 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 Q499Y3 187 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 WDR74Q6RFH5 385 aaPredicted RBP16.31■□□□□ 0.2
VIM-209ENST00000544301 MAMDC2Q7Z304 686 aaPredicted RBP16.31■□□□□ 0.2
VIM-209ENST00000544301 DPY19L4Q7Z388 723 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 KMT5CQ86Y97 462 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 SPEM1Q8N4L4 309 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 BMPERQ8N8U9 685 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 SLC25A36Q96CQ1 311 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 INTS14Q96SY0 518 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 NUDT22Q9BRQ3 303 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 NIPAL2Q9H841 368 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 IKZF2Q9UKS7 526 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 NUBP2Q9Y5Y2 271 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 FER1L5A0AVI2 2057 aa16.31■□□□□ 0.2
VIM-209ENST00000544301 TRAV6A0A075B6T7 132 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 TRBV5-5A0A0J9YX44 114 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 A0A1B0GTH9 108 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SUSD5O60279 629 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 DHFRP00374 187 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 TCRBP04435 133 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 RPS27P42677 84 aaKnown RBP16.3■□□□□ 0.2
VIM-209ENST00000544301 P2RX1P51575 399 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 POLR2HP52434 150 aaKnown RBP16.3■□□□□ 0.2
VIM-209ENST00000544301 YOD1Q5VVQ6 348 aaPredicted RBP16.3■□□□□ 0.2
VIM-209ENST00000544301 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SHISA6Q6ZSJ9 500 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 PLPP5Q8NEB5 264 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SMIM4Q8WVI0 70 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SLC25A38Q96DW6 304 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 TMED7-TICAM2A0A0A6YYA0 188 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 A6NL46 340 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 NPIPB7O75200 414 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 TMEM127O75204 238 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 MT-ATP6P00846 226 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 GIFP27352 417 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 FOXL2P58012 376 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 EGR3Q06889 387 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 MAB21L1Q13394 359 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 KLF9Q13886 244 aaPredicted RBP16.3■□□□□ 0.2
VIM-209ENST00000544301 MTFR2Q6P444 385 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 STAC2Q6ZMT1 411 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 FCRLAQ7L513 359 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 ZFAND1Q8TCF1 268 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 GPR119Q8TDV5 335 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 THEM6Q8WUY1 208 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SCMH1Q96GD3 660 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SLA2Q9H6Q3 261 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 AUNIPQ9H7T9 357 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 LIN7BQ9HAP6 207 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 SLC22A11Q9NSA0 550 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 TMED7Q9Y3B3 224 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 TMEM14AQ9Y6G1 99 aa16.3■□□□□ 0.2
VIM-209ENST00000544301 C7orf66A4D0T2 115 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 TRABD2BA6NFA1 517 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 OR4C45A6NMZ5 311 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 XKRYO14609 159 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 ANKRD34CP0C6C1 535 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 S100A1P23297 94 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 MAPK3P27361 379 aaPredicted RBP16.29■□□□□ 0.2
VIM-209ENST00000544301 SOX2P48431 317 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 CLDN12P56749 244 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 SGCBQ16585 318 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 CCDC92Q53HC0 331 aaPredicted RBP16.29■□□□□ 0.2
VIM-209ENST00000544301 COX15Q7KZN9 410 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 ADGRG3Q86Y34 549 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 SIX5Q8N196 739 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 OR2G2Q8NGZ5 317 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 METTL21AQ8WXB1 218 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 SHDQ96IW2 340 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 C7orf50Q9BRJ6 194 aaKnown RBP16.29■□□□□ 0.2
VIM-209ENST00000544301 CACNG6Q9BXT2 260 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 SLITRK2Q9H156 845 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 GHITMQ9H3K2 345 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 ZNF768Q9H5H4 540 aaKnown RBP16.29■□□□□ 0.2
VIM-209ENST00000544301 TCF7L1Q9HCS4 588 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 RABL2AQ9UBK7 228 aaPredicted RBP16.29■□□□□ 0.2
VIM-209ENST00000544301 RABL2BQ9UNT1 228 aa16.29■□□□□ 0.2
VIM-209ENST00000544301 PLGP00747 810 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms