RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 CER1O95813 267 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 PLGP00747 810 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 IGHMP01871 453 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 EPXP11678 715 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 FGF5P12034 268 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 PITPNBP48739 271 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 CENPAP49450 140 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 TMED10P49755 219 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 DUSP3P51452 185 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 BLVRAP53004 296 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 NANOS3P60323 173 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 IL11RAQ14626 422 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 SF3A2Q15428 464 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ACKR1Q16570 336 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 OR5M10Q6IEU7 315 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 TMEM205Q6UW68 189 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 OR4M2Q8NGB6 313 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF519Q8TB69 540 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ZC3HAV1LQ96H79 300 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 KCNJ15Q99712 375 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 OR11A1Q9GZK7 315 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 MMP28Q9H239 520 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 MRPL39Q9NYK5 338 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ANKRD61A6NGH8 418 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 TMEM200CA6NKL6 621 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 HSPB2A8KAH6 182 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 MEN1O00255 615 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 PLPP3O14495 311 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 TFECO14948 347 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 LYRM1O43325 122 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 FZD7O75084 574 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 UPK3AO75631 287 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 AKR7A3O95154 331 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ZFPL1O95159 310 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ABHD16AO95870 558 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 PAHP00439 452 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ATF1P18846 271 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 SRMP19623 302 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 APOBEC1P41238 236 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 KIR2DL3P43628 341 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ALKBH1Q13686 389 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 MFSD13AQ14CX5 517 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 HSPB2Q16082 182 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 CEP78Q5JTW2 689 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 LIPNQ5VXI9 398 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 OR2I1PQ8NGU4 316 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 CEP76Q8TAP6 659 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 ZNF587Q96SQ5 575 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 SMAD5Q99717 465 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 HDHD2Q9H0R4 259 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 GALNT9Q9HCQ5 603 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 NOX4Q9NPH5 578 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 RBFOX1Q9NWB1 397 aaKnown RBP9.78□□□□□ -0.84
NECAP1-206ENST00000542095 KLRF1Q9NZS2 232 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 IKZF2Q9UKS7 526 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 B9D1Q9UPM9 204 aa9.78□□□□□ -0.84
NECAP1-206ENST00000542095 MEIOCA2RUB1 952 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 B4DXG7 233 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 ITGA10O75578 1167 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 CCNKO75909 580 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 HLA-DQA2P01906 255 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 ALOX5APP20292 161 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 CCKBRP32239 447 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 HOXD12P35452 270 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 ZNF57Q68EA5 555 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 LCN10Q6JVE6 187 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 PYHIN1Q6K0P9 492 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 PLET1Q6UQ28 207 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 DPY19L4Q7Z388 723 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 UBE2J2Q8N2K1 259 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 ZNF248Q8NDW4 579 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 OR5AK2Q8NH90 309 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 SLC22A8Q8TCC7 542 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 THEM6Q8WUY1 208 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 RNF138Q8WVD3 245 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 RNF166Q96A37 237 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 C8orf44Q96CB5 159 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 CTRCQ99895 268 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 RNF121Q9H920 327 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 BRD7Q9NPI1 651 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 VSX1Q9NZR4 365 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 MED11Q9P086 117 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 AK6Q9Y3D8 172 aaKnown RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 D6RAR5 112 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 FTCDNL1E5RQL4 147 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 TMEM127O75204 238 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 MAPK3P27361 379 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 MSX1P28360 303 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 DLX5P56178 289 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 TRA2AQ13595 282 aaKnown RBP eCLIP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 SYT9Q86SS6 491 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 PMEPA1Q969W9 287 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 RFT1Q96AA3 541 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 DDIT4LQ96D03 193 aa9.77□□□□□ -0.85
NECAP1-206ENST00000542095 ZC3H10Q96K80 434 aaKnown RBP9.77□□□□□ -0.85
NECAP1-206ENST00000542095 FRMD6Q96NE9 622 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms