RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 TRIM40Q6P9F5 258 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 MED8Q96G25 268 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 AURKBQ96GD4 344 aaPredicted RBP3.39□□□□□ -1.87
C12orf56-204ENST00000541802 CRACR2AQ9BSW2 395 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 AZI2Q9H6S1 392 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 CTPS2Q9NRF8 586 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 EXD2Q9NVH0 621 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 PIGLQ9Y2B2 252 aa3.39□□□□□ -1.87
C12orf56-204ENST00000541802 F11RQ9Y624 299 aaKnown RBP3.39□□□□□ -1.87
C12orf56-204ENST00000541802 MSH6P52701 1360 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 CPLX1O14810 134 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 B4GALT2O60909 372 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 TSPAN12O95859 305 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 UBTFL1P0CB47 393 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-204ENST00000541802 IGHV3-43DP0DP04 118 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 GPR6P46095 362 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-204ENST00000541802 NPBWR2P48146 333 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 SLAQ13239 276 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 AQP6Q13520 282 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 LRRC31Q6UY01 552 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 EFL1Q7Z2Z2 1120 aaKnown RBP3.38□□□□□ -1.87
C12orf56-204ENST00000541802 C12orf56Q8IXR9 622 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 Q8N976 141 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 TRPV1Q8NER1 839 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 ACTRT1Q8TDG2 376 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 LRRC58Q96CX6 371 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 FOPNLQ96NB1 174 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 OR8B4Q96RC9 309 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 CNN2Q99439 309 aaKnown RBP3.38□□□□□ -1.87
C12orf56-204ENST00000541802 SORT1Q99523 831 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 NIPAL2Q9H841 368 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 LHX9Q9NQ69 397 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 PACSIN2Q9UNF0 486 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-204ENST00000541802 PIKFYVEQ9Y2I7 2098 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 NFASCO94856 1347 aa3.38□□□□□ -1.87
C12orf56-204ENST00000541802 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 IGKV1D-13A0A0B4J2D9 117 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 BTBD17A6NE02 478 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 XKRYO14609 159 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 ANGPTL7O43827 346 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 MGRN1O60291 552 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 IGKV1-13P0DP09 117 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 ZNF30P17039 623 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 FDFT1P37268 417 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 TFPI2P48307 235 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 CEBPDP49716 269 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-204ENST00000541802 SUB1P53999 127 aaKnown RBP eCLIP3.37□□□□□ -1.87
C12orf56-204ENST00000541802 SEC61GP60059 68 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 ACTR1AP61163 376 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 HMGCS1Q01581 520 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 RGS9BPQ6ZS82 235 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 LINC00173Q6ZV60 143 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 PCP2Q8IVA1 136 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 ZNF679Q8IYX0 411 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 BHLHE23Q8NDY6 225 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 SDR42E1Q8WUS8 393 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 GEMIN6Q8WXD5 167 aaKnown RBP3.37□□□□□ -1.87
C12orf56-204ENST00000541802 SGK3Q96BR1 496 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 PLEKHA8Q96JA3 519 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 RARRES2Q99969 163 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 ANKRD19PQ9H560 264 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 UGT1A7Q9HAW7 530 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 UGT1A10Q9HAW8 530 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 UGT1A8Q9HAW9 530 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 N6AMT1Q9Y5N5 214 aa3.37□□□□□ -1.87
C12orf56-204ENST00000541802 PPIAL4EA0A075B759 164 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 CIB4A0PJX0 185 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 PLAC8L1A1L4L8 177 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 HAS3O00219 553 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 FOXE1O00358 373 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 UPK3AO75631 287 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 SURF6O75683 361 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 WISP3O95389 354 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 IGHV2-5P01817 119 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 GAPDHP04406 335 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 FGF1P05230 155 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 PPIAL4FP0DN26 164 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 ATP5C1P36542 298 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 SSR1P43307 286 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 UBE2AP49459 152 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 IRX3P78415 501 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 IMMTQ16891 758 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 CASC1Q6TDU7 716 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 LYPD2Q6UXB3 125 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 KDM7AQ6ZMT4 941 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 TBC1D21Q8IYX1 336 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 PUSL1Q8N0Z8 303 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 ZCCHC7Q8N3Z6 543 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 CYB561D1Q8N8Q1 229 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 ZNF557Q8N988 423 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 EIF1ADQ8N9N8 165 aaKnown RBP3.36□□□□□ -1.87
C12orf56-204ENST00000541802 OR8J1Q8NGP2 316 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 SLC22A8Q8TCC7 542 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 ZFP90Q8TF47 636 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 HSFY1Q96LI6 401 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 SLC39A3Q9BRY0 314 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 GABARAPL3Q9BY60 117 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
C12orf56-204ENST00000541802 SGK2Q9HBY8 427 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms