RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 CD247P20963 164 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 ARR3P36575 388 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 GZMMP51124 257 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 CRYBA2P53672 197 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 BIDP55957 195 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 SNTB2Q13425 540 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 MELKQ14680 651 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 MFSD13AQ14CX5 517 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 PHC2Q8IXK0 858 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 DPP10Q8N608 796 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 FAM169BQ8N8A8 192 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 SCAIQ8N9R8 606 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 OR4F15Q8NGB8 312 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 OR6N1Q8NGY5 312 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 OR10A6Q8NH74 314 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 MSI2Q96DH6 328 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 PIMREGQ9BSJ6 248 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 BPESC1Q9GZL8 116 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 KAT8Q9H7Z6 458 aaKnown RBP12.51□□□□□ -0.41
MSRB3-209ENST00000540804 TAS2R5Q9NYW4 299 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 SLC7A7Q9UM01 511 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 POFUT2Q9Y2G5 429 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 CORINQ9Y5Q5 1042 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 NOX1Q9Y5S8 564 aa12.51□□□□□ -0.41
MSRB3-209ENST00000540804 A0A0G2JND7 137 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF726A6NNF4 738 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 HMGB1P1B2RPK0 211 aaPredicted RBP12.5□□□□□ -0.41
MSRB3-209ENST00000540804 CHP2O43745 196 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 PDE5AO76074 875 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 IGFBP5P24593 272 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 IL2RGP31785 369 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 PTDSS1P48651 473 aaKnown RBP12.5□□□□□ -0.41
MSRB3-209ENST00000540804 DAG1Q14118 895 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 GSG1Q2KHT4 349 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 IQCCQ4KMZ1 466 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 PODNL1Q6PEZ8 512 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 OR5J2Q8NH18 312 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 ADAMTS16Q8TE57 1224 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 BEX2Q9BXY8 128 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF442Q9H7R0 627 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
MSRB3-209ENST00000540804 LOC100289279A0A1B0GTE1 492 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 LOC390937A0A1W2PQ73 354 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 LMX1BO60663 402 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
MSRB3-209ENST00000540804 SASH3O75995 380 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 STAMBPO95630 424 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 IFNA2P01563 188 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 ADRA2AP08913 450 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 FAM157CP0CG43 387 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 APEHP13798 732 aaKnown RBP12.49□□□□□ -0.41
MSRB3-209ENST00000540804 DAOP14920 347 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
MSRB3-209ENST00000540804 GIPRP48546 466 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 PPOXP50336 477 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 RBBP4Q09028 425 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 RAB39AQ14964 217 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF74Q16587 644 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 RABL3Q5HYI8 236 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF613Q6PF04 617 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 PXKQ7Z7A4 578 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 LRP11Q86VZ4 500 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 SKA3Q8IX90 412 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 BHLHE22Q8NFJ8 381 aaPredicted RBP12.49□□□□□ -0.41
MSRB3-209ENST00000540804 SPATA3Q8NHX4 192 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 LRR1Q96L50 414 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 FOXB1Q99853 325 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 PRSS27Q9BQR3 290 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 TMEM120AQ9BXJ8 343 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
MSRB3-209ENST00000540804 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 ABCA1O95477 2261 aa12.49□□□□□ -0.41
MSRB3-209ENST00000540804 NDUFS8O00217 210 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 PHF1O43189 567 aaPredicted RBP12.48□□□□□ -0.41
MSRB3-209ENST00000540804 FMO6PO60774 539 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 C8BP07358 591 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF35P13682 527 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 TCN1P20061 433 aaPredicted RBP12.48□□□□□ -0.41
MSRB3-209ENST00000540804 NR4A1P22736 598 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 PAX7P23759 505 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 PCGF2P35227 344 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 CSNK1A1P48729 337 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 RAB1AP62820 205 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 TRIP10Q15642 601 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 VMACQ2NL98 169 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 TTC33Q6PID6 262 aaPredicted RBP12.48□□□□□ -0.41
MSRB3-209ENST00000540804 HDXQ7Z353 690 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 PFN4Q8NHR9 129 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 SYT3Q9BQG1 590 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms