RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 OR6X1Q8NH79 312 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 SLC7A13Q8TCU3 470 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 ACOT11Q8WXI4 607 aaPredicted RBP16■□□□□ 0.15
SNRPA1-203ENST00000540017 CXXC4Q9H2H0 198 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 TAS2R1Q9NYW7 299 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 EDARQ9UNE0 448 aa16■□□□□ 0.15
SNRPA1-203ENST00000540017 M0R1B8 84 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 ABCD4O14678 606 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 PDE5AO76074 875 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 RHCEP18577 417 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 ATP6V1B2P21281 511 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 PRPS1P60891 318 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 TUBA1BP68363 451 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 TUBA4AP68366 448 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 RUNX1T1Q06455 604 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 DEFB113Q30KQ7 82 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 ANKRD16Q6P6B7 361 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 PODNL1Q6PEZ8 512 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF730Q6ZMV8 503 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 MBOAT2Q6ZWT7 520 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 TUBA1AQ71U36 451 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 CYP4Z1Q86W10 505 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 IGFBPL1Q8WX77 278 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 TMEM54Q969K7 222 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 FOXC2Q99958 501 aa15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 PRRC2AP48634 2157 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-203ENST00000540017 A0A1W2PRQ8 180 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF503-AS2A6NEH8 195 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 UBOX5O94941 541 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 H1F0P07305 194 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 CD40P25942 277 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 HOXC12P31275 282 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 SH3BGRP55822 239 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 RPS4XP62701 263 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 MS4A2Q01362 244 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 DGCR6Q14129 220 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF672Q499Z4 452 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 TMEM108Q6UXF1 575 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 CYP2R1Q6VVX0 501 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 RNF113BQ8IZP6 322 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF611Q8N823 705 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 OR6N1Q8NGY5 312 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 MAGEE2Q8TD90 523 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 SLC25A44Q96H78 314 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 CLPTM1LQ96KA5 538 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 DHRS1Q96LJ7 313 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 ADAD1Q96M93 576 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 FUZQ9BT04 418 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 ANKRD19PQ9H560 264 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 INIPQ9NRY2 104 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 ACTR3BQ9P1U1 418 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 HIF3AQ9Y2N7 669 aa15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 FAM32AQ9Y421 112 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-203ENST00000540017 DSCAMO60469 2012 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 TRAV27A0A087WT01 109 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 ARPC4-TTLL3A0A0A6YYG9 625 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 TRBV4-1A0A0J9YWV2 114 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 HTR3EA5X5Y0 456 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF99A8MXY4 864 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 CDC42EP2O14613 210 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 BCL10O95999 233 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 PGA4P0DJD7 388 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 PGA3P0DJD8 388 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 PTAFRP25105 342 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 GPR4P46093 362 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 CSNK1A1P48729 337 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 SEC23BQ15437 767 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 LRFN4Q6PJG9 635 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 KLHL17Q6TDP4 642 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 KLHL24Q6TFL4 600 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 SPNS3Q6ZMD2 512 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 C20orf204Q6ZNR8 217 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 LRRC75AQ8NAA5 344 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 OR13C2Q8NGS9 318 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 OR51A7Q8NH64 312 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 ASB10Q8WXI3 467 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 ALPK1Q96QP1 1244 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 TNFRSF13CQ96RJ3 184 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 CCL19Q99731 98 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 PIP5K1AQ99755 562 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 ULBP2Q9BZM5 246 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 GLTPQ9NZD2 209 aa15.97■□□□□ 0.15
SNRPA1-203ENST00000540017 A0A1W2PRG6 482 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 TCRBV5S2A0A599 114 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 EFCAB9A8MZ26 197 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 WNT11O96014 354 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 SAGP10523 405 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF26P17031 533 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 FGD3Q5JSP0 725 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 ARMC4Q5T2S8 1044 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 B3GLCTQ6Y288 498 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 TMPRSS11FQ6ZWK6 438 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 IGFN1Q86VF2 1251 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 ARHGAP24Q8N264 748 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 OR52J3Q8NH60 311 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 ZNF566Q969W8 418 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 MRPL13Q9BYD1 178 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 C1orf21Q9H246 121 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 OBP2BQ9NPH6 170 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms