RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RPA2P15927 270 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 NT5EP21589 574 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 AGTR1P30556 359 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SSTR2P30874 369 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 FAUP35544 74 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 BUD31P41223 144 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SRP9P49458 86 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SELENOPP49908 381 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 CTSCP53634 463 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 VSX2P58304 361 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PRR5P85299 388 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 DGCR2P98153 550 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SRSF4Q08170 494 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 CRYZQ08257 329 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SCRN3Q0VDG4 424 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 DBPQ10586 325 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 EIF3IQ13347 325 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 GK2Q14410 553 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 EIPR1Q53HC9 387 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 CLVS2Q5SYC1 327 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 OR4C11Q6IEV9 310 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 HEPHL1Q6MZM0 1159 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 Q6ZVL8 140 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 COMTD1Q86VU5 262 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PARGQ86W56 976 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 TMEM17Q86X19 198 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 CCDC36Q8IYA8 594 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SAMD14Q8IZD0 417 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 OR52L1Q8NGH7 329 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 OR51Q1Q8NH59 317 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 RPS4Y2Q8TD47 263 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SMAP2Q8WU79 429 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 FCAMRQ8WWV6 532 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ASB12Q8WXK4 309 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SCAMP4Q969E2 229 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PHYHIPLQ96FC7 376 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ELMOD3Q96FG2 381 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SLC41A3Q96GZ6 507 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PGLYRP3Q96LB9 341 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 HS6ST2Q96MM7 605 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 FCRL4Q96PJ5 515 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 TEAD3Q99594 435 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SEC22CQ9BRL7 303 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PRDM14Q9GZV8 571 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 SLC38A1Q9H2H9 487 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ISG20L2Q9H9L3 353 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 NOX3Q9HBY0 568 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 NRIP3Q9NQ35 241 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ZCCHC3Q9NUD5 404 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 OR6C2Q9NZP2 312 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 TRPC4Q9UBN4 977 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ST6GALNAC2Q9UJ37 374 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 PURGQ9UJV8 347 aaKnown RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 GPR52Q9Y2T5 361 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 ETV7Q9Y603 341 aa6.99□□□□□ -1.29
CCDC60-204ENST00000539847 UBR5O95071 2799 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 TP53BP1Q12888 1972 aaPredicted RBP6.99□□□□□ -1.29
CCDC60-204ENST00000539847 RAB19A4D1S5 217 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 TMEM202A6NGA9 273 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 OR2AG2A6NM03 316 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 PRR23D1E9PI22 279 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 DNASE2O00115 360 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SAP18O00422 153 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SOCS6O14544 535 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GNB5O14775 395 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GMDSO60547 372 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 RAD1O60671 282 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SDC3O75056 442 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 PTP4A3O75365 173 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SH3BGRLO75368 114 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ALDOBP05062 364 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 OR2T7P0C7T2 308 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 UBBP0CG47 229 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 UBCP0CG48 685 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 PRR23D2P0DMB1 279 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 MGMTP16455 207 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 BMP7P18075 431 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ATF1P18846 271 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CSNK2A2P19784 350 aaPredicted RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 RAB6AP20340 208 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 SLC2A5P22732 501 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CFPP27918 469 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 PDHA2P29803 388 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 RABIFP47224 123 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 PREPP48147 710 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 CCR6P51684 374 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GPR85P60893 370 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ACTA2P62736 377 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 RPS27AP62979 156 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 UBA52P62987 128 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 RPS21P63220 83 aaKnown RBP6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ACTG2P63267 376 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 DPTQ07507 201 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 GGTLC2Q14390 218 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 IRF4Q15306 451 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ZIC1Q15915 447 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ZSWIM7Q19AV6 140 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 MICBQ29980 383 aa6.98□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF805Q5CZA5 627 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms