RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 KTI12Q96EK9 354 aaPredicted RBP13.04□□□□□ -0.32
USB1-203ENST00000539737 HSH2DQ96JZ2 352 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 SORCS2Q96PQ0 1159 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 CDRT15Q96T59 188 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
USB1-203ENST00000539737 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 GRIP2Q9C0E4 1043 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 TAS2R16Q9NYV7 291 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 SLC7A7Q9UM01 511 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 MGAT4BQ9UQ53 548 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 LRP5LA4QPB2 252 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 ZNF716A6NP11 495 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 AKR7A3O95154 331 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 ITGA5P08648 1049 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 THRBP10828 461 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 SLC25A16P16260 332 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 NCK1P16333 377 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 TCN1P20061 433 aaPredicted RBP13.03□□□□□ -0.32
USB1-203ENST00000539737 OR1E2P47887 323 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 GLYATQ6IB77 296 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 TTC33Q6PID6 262 aaPredicted RBP13.03□□□□□ -0.32
USB1-203ENST00000539737 FKBP9P1Q75LS8 142 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
USB1-203ENST00000539737 VTCN1Q7Z7D3 282 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 CCDC103Q8IW40 242 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 WDR31Q8NA23 367 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 FBXO17Q96EF6 278 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 PRRC1Q96M27 445 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 GORASP2Q9H8Y8 452 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 CD300AQ9UGN4 299 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 CORINQ9Y5Q5 1042 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 SNX13Q9Y5W8 968 aa13.03□□□□□ -0.32
USB1-203ENST00000539737 KRT33AO76009 404 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 MT-ATP6P00846 226 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 IL2RGP31785 369 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
USB1-203ENST00000539737 SLC17A1Q14916 467 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 MST1LQ2TV78 715 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 KLHL24Q6TFL4 600 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 LINC00114Q6XXX2 140 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.33
USB1-203ENST00000539737 TMEM99Q8N816 258 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 SCAIQ8N9R8 606 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 FAM156AQ8NDB6 213 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 ADPRHL1Q8NDY3 354 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 TAAR8Q969N4 342 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 SLC25A36Q96CQ1 311 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 FOXN4Q96NZ1 517 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 ASPNQ9BXN1 380 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 C1orf21Q9H246 121 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 MUC13Q9H3R2 512 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 DCAF13Q9NV06 445 aaKnown RBP13.02□□□□□ -0.33
USB1-203ENST00000539737 TMEM160Q9NX00 188 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 KCNS2Q9ULS6 477 aa13.02□□□□□ -0.33
USB1-203ENST00000539737 PRPF19Q9UMS4 504 aaKnown RBP13.02□□□□□ -0.33
USB1-203ENST00000539737 VWC2LB2RUY7 222 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 H7C417 338 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 ARPC2O15144 300 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 RGS9O75916 674 aaPredicted RBP13.01□□□□□ -0.33
USB1-203ENST00000539737 LYPD3O95274 346 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 THY1P04216 161 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 ITGA2P17301 1181 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 PTAFRP25105 342 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 P2RY4P51582 365 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 EFNA4P52798 201 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 DSCR9P59020 149 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 RUNX1T1Q06455 604 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 ST3GAL3Q11203 375 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 GABRA6Q16445 453 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 C1QTNF12Q5T7M4 302 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 FAM166AQ6J272 317 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 WDR88Q6ZMY6 472 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 GPAT4Q86UL3 456 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 TSPYL5Q86VY4 417 aaPredicted RBP13.01□□□□□ -0.33
USB1-203ENST00000539737 CYP4Z1Q86W10 505 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 OFCC1Q8IZS5 231 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 C10orf53Q8N6V4 93 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 OR9K2Q8NGE7 335 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 TMEM45BQ96B21 275 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 NSMCE2Q96MF7 247 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 MALT1Q9UDY8 824 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 RIMS3Q9UJD0 308 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 MOKQ9UQ07 419 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 FLVCR1Q9Y5Y0 555 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 MEGF8Q7Z7M0 2845 aa13.01□□□□□ -0.33
USB1-203ENST00000539737 M0R082 166 aa13□□□□□ -0.33
USB1-203ENST00000539737 UBOX5O94941 541 aa13□□□□□ -0.33
USB1-203ENST00000539737 WNT11O96014 354 aa13□□□□□ -0.33
USB1-203ENST00000539737 BGLAPP02818 100 aa13□□□□□ -0.33
USB1-203ENST00000539737 APEHP13798 732 aaKnown RBP13□□□□□ -0.33
USB1-203ENST00000539737 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
USB1-203ENST00000539737 GRPRP30550 384 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms