RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 NPIPA2E9PIF3 369 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 NPIPA3F8WFD2 350 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 TRAF3IP2O43734 574 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-204ENST00000539721 CPN1P15169 458 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 SLC16A1P53985 500 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 BIDP55957 195 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 RAP1BP61224 184 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 RPS7P62081 194 aaKnown RBP14.42□□□□□ -0.1
TRAF3-204ENST00000539721 RAP1AP62834 184 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 SLC35A2P78381 396 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 APOFQ13790 326 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 POU4F3Q15319 338 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 EEF1A1P5Q5VTE0 462 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 FAM205BPQ63HN1 556 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 TMEM154Q6P9G4 183 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 FAM180AQ6UWF9 173 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 MEPCEQ7L2J0 689 aaKnown RBP14.42□□□□□ -0.1
TRAF3-204ENST00000539721 FCRLAQ7L513 359 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 DDOQ99489 341 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 COPS4Q9BT78 406 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 DUSP21Q9H596 190 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 CCNB1IP1Q9NPC3 277 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 RPRD1BQ9NQG5 326 aaKnown RBP14.42□□□□□ -0.1
TRAF3-204ENST00000539721 PLSCR2Q9NRY7 297 aa14.42□□□□□ -0.1
TRAF3-204ENST00000539721 MCTS1Q9ULC4 181 aaKnown RBP14.42□□□□□ -0.1
TRAF3-204ENST00000539721 A0A087WXM4 84 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 EFCAB10A6NFE3 127 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 WISP2O76076 250 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 GYPBP06028 91 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 SMIM18P0DKX4 95 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 CLUP10909 449 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 ATP6V1B1P15313 513 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 HTR1FP30939 366 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 PIGFQ07326 219 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 DBPQ10586 325 aaPredicted RBP14.41□□□□□ -0.1
TRAF3-204ENST00000539721 ABLIM2Q6H8Q1 611 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 NHLRC1Q6VVB1 395 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 HDDC2Q7Z4H3 204 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 OR9K2Q8NGE7 335 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 MYDGFQ969H8 173 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 SARAFQ96BY9 339 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 SNX18Q96RF0 628 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 EMC6Q9BV81 110 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 SF3B5Q9BWJ5 86 aaKnown RBP14.41□□□□□ -0.1
TRAF3-204ENST00000539721 MRPS26Q9BYN8 205 aaKnown RBP14.41□□□□□ -0.1
TRAF3-204ENST00000539721 NMNAT2Q9BZQ4 307 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 CCDC90BQ9GZT6 254 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 CNOT2Q9NZN8 540 aaKnown RBP14.41□□□□□ -0.1
TRAF3-204ENST00000539721 ERVK-18Q9QC07 812 aa14.41□□□□□ -0.1
TRAF3-204ENST00000539721 PRSS37A4D1T9 235 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 SLC22A31A6NKX4 558 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 RGS10O43665 173 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 SLC2A5P22732 501 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 SLC15A1P46059 708 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 MTNR1AP48039 350 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 RUNX1T1Q06455 604 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 LGALS3BPQ08380 585 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 SLC17A1Q14916 467 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 PON3Q15166 354 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 CREB3L2Q70SY1 520 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 PM20D2Q8IYS1 436 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 STX19Q8N4C7 294 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 RNFT2Q96EX2 444 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 PRRG4Q9BZD6 226 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 SYT4Q9H2B2 425 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 FKBP14Q9NWM8 211 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 ASB6Q9NWX5 421 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 ZMIZ1Q9ULJ6 1067 aa14.4□□□□□ -0.1
TRAF3-204ENST00000539721 A0A1B0GTH9 108 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 CCDC182A6NF36 153 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 CYTIPO60759 359 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 TRMUO75648 421 aaKnown RBP14.39□□□□□ -0.11
TRAF3-204ENST00000539721 PIPP12273 146 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-204ENST00000539721 SPI1P17947 270 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 SLC25A1P53007 311 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 CLDN17P56750 224 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 KLHL22Q53GT1 634 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 ZNF773Q6PK81 442 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 Q8NA96 180 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 TUBA1CQ9BQE3 449 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 PRDM14Q9GZV8 571 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 VSX1Q9NZR4 365 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-204ENST00000539721 WARS2Q9UGM6 360 aaKnown RBP14.39□□□□□ -0.11
TRAF3-204ENST00000539721 SNX5Q9Y5X3 404 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 SLC22A23A1A5C7 686 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 SLC35F4A4IF30 521 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 ZNF726A6NNF4 738 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 ZNF716A6NP11 495 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 CDK1P06493 297 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 STSP08842 583 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 HTR1AP08908 422 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 RASGEF1BQ0VAM2 473 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 ST3GAL4Q11206 333 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 TMED1Q13445 227 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 CAMK2DQ13557 499 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 GTF2IRD2BQ6EKJ0 949 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 GTF2IRD2Q86UP8 949 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 WDFY1Q8IWB7 410 aa14.39□□□□□ -0.11
TRAF3-204ENST00000539721 EXD3Q8N9H8 876 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms