RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CD14P08571 375 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 CAPZBP47756 277 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 PER3P56645 1201 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 SLC37A1P57057 533 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
UBE3B-210ENST00000539599 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 GAS6Q14393 721 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 TMEM69Q5SWH9 247 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 PRSS35Q8N3Z0 413 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 EXD3Q8N9H8 876 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 OR5AK2Q8NH90 309 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 HEXA-AS1Q9H8Q6 139 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 GRHPRQ9UBQ7 328 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 ING4Q9UNL4 249 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 FOXJ3Q9UPW0 622 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 PCDHGA5Q9Y5G8 931 aa12.76□□□□□ -0.37
UBE3B-210ENST00000539599 IGHV3-20A0A0C4DH32 117 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 A0A1W2PQ72 361 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 FAM221BA6H8Z2 402 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 SCDO00767 359 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ARPC3O15145 178 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 SMAD9O15198 467 aaKnown RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 KDM4BO94953 1096 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 HLA-DQA2P01906 255 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 IL11P20809 199 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 GABRA4P48169 554 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 CAMK2DQ13557 499 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 FNDC7Q5VTL7 733 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 NHLRC1Q6VVB1 395 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ADAMTS14Q8WXS8 1223 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 C1QTNF6Q9BXI9 259 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 OR11A1Q9GZK7 315 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 TCF7L1Q9HCS4 588 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 STMN3Q9NZ72 180 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 LAMP5Q9UJQ1 280 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 CDC40O60508 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 SIX6O95475 246 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 DNASE1P24855 282 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 P2RX1P51575 399 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 NR0B1P51843 470 aaKnown RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 P2RX3P56373 397 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 PITPNAQ00169 270 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 MELKQ14680 651 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 FAM209AQ5JX71 171 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 WBP2NLQ6ICG8 309 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 CREB3L2Q70SY1 520 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 BTN2A1Q7KYR7 527 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 NLRC3Q7RTR2 1065 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 TMEM106AQ96A25 262 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 PPIEQ9UNP9 301 aaKnown RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 HIF3AQ9Y2N7 669 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 FER1L5A0AVI2 2057 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 A0A1W2PPC4 97 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 OR5K4A6NMS3 321 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 LEUTXA8MZ59 168 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF264O43296 627 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 MPZL1O95297 269 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ABHD16AO95870 558 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ASAH2BP0C7U1 165 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 SDHAP31040 664 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ZBTB37Q5TC79 503 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 TEX261Q6UWH6 196 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF676Q8N7Q3 588 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF680Q8NEM1 530 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 OR51D1Q8NGF3 324 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 THAP3Q8WTV1 239 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-210ENST00000539599 LANCL2Q9NS86 450 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 U3KQ87 197 aa12.75□□□□□ -0.37
UBE3B-210ENST00000539599 TEX46H3BTG2 121 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 PPM1BO75688 479 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 PRPS1P60891 318 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 DMWDQ09019 674 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 SLC35F3Q8IY50 421 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 UXS1Q8NBZ7 420 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 NSMAFQ92636 917 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 DVL3Q92997 716 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-210ENST00000539599 GPR137Q96N19 417 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 OR2M2Q96R28 347 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 NUDT9Q9BW91 350 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 UBQLN4Q9NRR5 601 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 RTTNQ86VV8 2226 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 H0YIG0 161 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 NOS1APO75052 506 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-210ENST00000539599 SULT1A3P0DMM9 295 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 SULT1A4P0DMN0 295 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
UBE3B-210ENST00000539599 CD276Q5ZPR3 534 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 GPR119Q8TDV5 335 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 EMC7Q9NPA0 242 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 ZNF69Q9UC07 566 aa12.74□□□□□ -0.37
UBE3B-210ENST00000539599 ELF5Q9UKW6 265 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms