RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KLHL9Q9P2J3 617 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 RASD1Q9Y272 281 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 SIGLEC7Q9Y286 467 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 TMEM5Q9Y2B1 443 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 HSPE1-MOB4S4R3N1 261 aa11.5□□□□□ -0.57
CCDC42-202ENST00000539522 DCHS2Q6V1P9 2916 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 EFCAB9A8MZ26 197 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 E9PQ18 207 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 C11orf98E9PRG8 122 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 PLGP00747 810 aaPredicted RBP11.49□□□□□ -0.57
CCDC42-202ENST00000539522 F13BP05160 661 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
CCDC42-202ENST00000539522 CD8BP10966 210 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 FPR3P25089 353 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 CCKARP32238 428 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 OPRM1P35372 400 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 OR3A2P47893 321 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 PER3P56645 1201 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 PUDPQ08623 228 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 MFSD13AQ14CX5 517 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 FBXL19-AS1Q494R0 122 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 MTFR2Q6P444 385 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 XKRXQ6PP77 449 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 THAP5Q7Z6K1 395 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 PXKQ7Z7A4 578 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 IGFN1Q86VF2 1251 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 TMEM123Q8N131 208 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 SETD9Q8NE22 299 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 OR8D4Q8NGM9 314 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 OR51A7Q8NH64 312 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 ZHX1-C8orf76Q96EF9 292 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 HRASLS5Q96KN8 279 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 MUS81Q96NY9 551 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 PSMG3-AS1Q96PY0 264 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 APOL4Q9BPW4 351 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 EMC6Q9BV81 110 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 ASPNQ9BXN1 380 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 UBAP1Q9NZ09 502 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 REV1Q9UBZ9 1251 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 NDRG4Q9ULP0 352 aaKnown RBP11.49□□□□□ -0.57
CCDC42-202ENST00000539522 GMPPBQ9Y5P6 360 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 ALPK2Q86TB3 2170 aa11.49□□□□□ -0.57
CCDC42-202ENST00000539522 HRNRQ86YZ3 2850 aaPredicted RBP11.48□□□□□ -0.57
CCDC42-202ENST00000539522 CRYBG3Q68DQ2 2970 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 MCIDASD6RGH6 385 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 BLOC1S5-TXNDC5H3BN57 136 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 VAMP5O95183 116 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 CLDN14O95500 239 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 GNAO1P09471 354 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 ADORA3P0DMS8 318 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 GTF2E2P29084 291 aaKnown RBP11.48□□□□□ -0.57
CCDC42-202ENST00000539522 CHN2P52757 468 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 SMSP52788 366 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 POU3F1Q03052 451 aaPredicted RBP11.48□□□□□ -0.57
CCDC42-202ENST00000539522 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 TSPO2Q5TGU0 170 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 RASSF6Q6ZTQ3 369 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 NANOGNBQ7Z5D8 188 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 C8orf59Q8N0T1 100 aaPredicted RBP11.48□□□□□ -0.57
CCDC42-202ENST00000539522 GABRG1Q8N1C3 465 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 ASB5Q8WWX0 329 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 OR2M2Q96R28 347 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 YTHDF1Q9BYJ9 559 aaKnown RBP11.48□□□□□ -0.57
CCDC42-202ENST00000539522 PLA2G12AQ9BZM1 189 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 IL20RAQ9UHF4 553 aa11.48□□□□□ -0.57
CCDC42-202ENST00000539522 MAGEA13PA6NCF6 341 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 UNC119BA6NIH7 251 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 IMPA2O14732 288 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 UPK3AO75631 287 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 IGHV3-9P01782 118 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 SAGP10523 405 aaPredicted RBP11.47□□□□□ -0.57
CCDC42-202ENST00000539522 IFNGR1P15260 489 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 IGFBP2P18065 325 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 SLC9A3P48764 834 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 CLDN17P56750 224 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 DBPQ10586 325 aaPredicted RBP11.47□□□□□ -0.57
CCDC42-202ENST00000539522 SNTB1Q13884 538 aaKnown RBP11.47□□□□□ -0.57
CCDC42-202ENST00000539522 MELKQ14680 651 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 PTGES3Q15185 160 aaKnown RBP11.47□□□□□ -0.57
CCDC42-202ENST00000539522 ZBED5Q49AG3 693 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 TMEM201Q5SNT2 666 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 EEF1A1P5Q5VTE0 462 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF691Q5VV52 312 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 GTF2IRD2BQ6EKJ0 949 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 UGT2A3Q6UWM9 527 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 FAM122BQ7Z309 247 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 OAFQ86UD1 273 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 GTF2IRD2Q86UP8 949 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 DEPDC4Q8N2C3 294 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
CCDC42-202ENST00000539522 TSPAN32Q96QS1 320 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 PITX2Q99697 317 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 EGLN3Q9H6Z9 239 aa11.47□□□□□ -0.57
CCDC42-202ENST00000539522 SLC7A10Q9NS82 523 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms