RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 KRT34O76011 436 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 HLA-HP01893 362 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CD79AP11912 226 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ARR3P36575 388 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 BIDP55957 195 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 HGFACQ04756 655 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF813Q6ZN06 617 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SLC46A3Q7Z3Q1 461 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CARM1Q86X55 608 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 OR4F15Q8NGB8 312 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NANOS1Q8WY41 292 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PROX1Q92786 737 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 LRR1Q96L50 414 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SORCS2Q96PQ0 1159 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PCDHAC1Q9H158 963 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NANSQ9NR45 359 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ADAM21Q9UKJ8 722 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 POFUT2Q9Y2G5 429 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SH3GLB1Q9Y371 365 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 JMJD1CQ15652 2540 aa16.54■□□□□ 0.24
TNFRSF1A-212ENST00000539372 IGHV2OR16-5A0A0B4J2B6 119 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 BBIP1A8MTZ0 92 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CRLF1O75462 422 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 F12P00748 615 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 B4GALT1P15291 398 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CSNK1A1P48729 337 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 GUCY1A3Q02108 690 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PIGFQ07326 219 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MAPRE2Q15555 327 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 COQ5Q5HYK3 327 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 CCDC36Q8IYA8 594 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ANKS4BQ8N8V4 417 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 C10orf105Q8TEF2 133 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 RASSF5Q8WWW0 418 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MPP4Q96JB8 637 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 VRK1Q99986 396 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NOX3Q9HBY0 568 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TAS2R5Q9NYW4 299 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ABCA1O95477 2261 aa16.53■□□□□ 0.24
TNFRSF1A-212ENST00000539372 B9A039 149 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 RNF13O43567 381 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 UMPSP11172 480 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 THBS4P35443 961 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MELKQ14680 651 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 DEF8Q6ZN54 512 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 SLC35D2Q76EJ3 337 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 NUP37Q8NFH4 326 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 C10orf82Q8WW14 230 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MS4A3Q96HJ5 214 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF583Q96ND8 569 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 TNFRSF13CQ96RJ3 184 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 PRSS27Q9BQR3 290 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ZNF426Q9BUY5 554 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 MRGBPQ9NV56 204 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 B3GNT2Q9NY97 397 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 FKBP7Q9Y680 259 aa16.52■□□□□ 0.24
TNFRSF1A-212ENST00000539372 ARFGEF3Q5TH69 2177 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TLX2O43763 284 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 NPPAP01160 153 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 HIST1H2ABP04908 130 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CSF3P09919 207 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SLC25A16P16260 332 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 OR1E2P47887 323 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TAS2R41P59536 307 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 LOXL1Q08397 574 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZP4Q12836 540 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 EFNB3Q15768 340 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CARTPTQ16568 116 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 GSG1Q2KHT4 349 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TMEM249Q2WGJ8 235 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 KRT80Q6KB66 452 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ERICH5Q6P6B1 374 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 HIST3H2AQ7L7L0 130 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 OR6X1Q8NH79 312 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PFN4Q8NHR9 129 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 HIST1H2ACQ93077 130 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 FOXB1Q99853 325 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SLC19A3Q9BZV2 496 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PLK3Q9H4B4 646 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 MEPEQ9NQ76 525 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ARMCX1Q9P291 453 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF229Q9UJW7 825 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 BAG5Q9UL15 447 aa16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SONP18583 2426 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ANK3Q12955 4377 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 hCG_2039718K7EN88 272 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PDE5AO76074 875 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ASAH2BP0C7U1 165 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PTDSS1P48651 473 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PDLIM4P50479 330 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SNTB2Q13425 540 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 LRRC23Q53EV4 343 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF627Q7L945 461 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SPATA21Q7Z572 469 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 NANOGNBQ7Z5D8 188 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 NKAIN4Q8IVV8 208 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SVOPLQ8N434 492 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 POU5F2Q8N7G0 328 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PCYOX1LQ8NBM8 494 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms