RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 TVP23AA6NH52 213 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CASTOR2A6NHX0 329 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 WASH3PC4AMC7 463 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 F5H0A9 414 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 J3QLW9 94 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 M0R3H8 397 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SULT2B1O00204 365 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 BHLHE40O14503 412 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SOCS6O14544 535 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 BCAT2O15382 392 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 PRAMEF12O95522 483 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SNAI1O95863 264 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 AK1P00568 194 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 RLN1P04808 185 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CD2P06729 351 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 KLK1P06870 262 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CTSLP07711 333 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CD14P08571 375 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 HOXB5P09067 269 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TACSTD2P09758 323 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 OR4E1P0C645 316 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 LYL1P12980 280 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ZNF44P15621 663 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 NPPBP16860 134 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ZNF14P17017 642 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 ZNF19P17023 458 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 GJA1P17302 382 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 HOXA5P20719 270 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 MAOAP21397 527 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 IMPA1P29218 277 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 DLSTP36957 453 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CASRP41180 1078 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CX3CR1P49238 355 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 LUMP51884 338 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 DGKEP52429 567 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 RIDAP52758 137 aaKnown RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 PNLIPRP2P54317 469 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 EPHB3P54753 998 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 DVL1P1P54792 670 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 RPS11P62280 158 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP28-207ENST00000538475 MESP2Q0VG99 397 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 FOXO1Q12778 655 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 BIKQ13323 160 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 VGLL4Q14135 290 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ZNF234Q14588 700 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 INSL4Q14641 139 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 MEF2DQ14814 521 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 PTPRRQ15256 657 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 RHEBQ15382 184 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TEAD2Q15562 447 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SYPL1Q16563 259 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 C4orf46Q504U0 113 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 LY6G6FQ5SQ64 297 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 C9orf131Q5VYM1 1079 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TCEAL6Q6IPX3 200 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 PLBD1Q6P4A8 553 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ARHGAP11AQ6P4F7 1023 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ANKRD16Q6P6B7 361 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CRTC1Q6UUV9 634 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TMEM205Q6UW68 189 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 LCTLQ6UWM7 567 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 WDR88Q6ZMY6 472 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TMCO2Q7Z6W1 182 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 TMEM173Q86WV6 379 aaPredicted RBP6.11□□□□□ -1.43
USP28-207ENST00000538475 DCUN1D3Q8IWE4 304 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SLC35F3Q8IY50 421 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 GALNT16Q8N428 558 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TMEM99Q8N816 258 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 BMPERQ8N8U9 685 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ZDHHC22Q8N966 263 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ZNF565Q8N9K5 539 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 C7orf57Q8NEG2 295 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 OR4D9Q8NGE8 314 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 OR5AP2Q8NGF4 316 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 OR4C16Q8NGL9 310 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SYNPRQ8TBG9 265 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 PHOSPHO2Q8TCD6 241 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 GPR148Q8TDV2 347 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 NUDCD2Q8WVJ2 157 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ZFPM2Q8WW38 1151 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SMPDL3BQ92485 455 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 RAB24Q969Q5 203 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 NEIL2Q969S2 332 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 HIST1H2BAQ96A08 127 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TM4SF18Q96CE8 201 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 PIK3IP1Q96FE7 263 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 C4orf36Q96KX1 117 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TMEM68Q96MH6 324 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ADAM2Q99965 735 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 PCBD2Q9H0N5 130 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 SYT4Q9H2B2 425 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 LMAN1LQ9HAT1 526 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ADGRL4Q9HBW9 690 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 TREM1Q9NP99 234 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 ACKR4Q9NPB9 350 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 CUTCQ9NTM9 273 aa6.11□□□□□ -1.43
USP28-207ENST00000538475 GFOD1Q9NXC2 390 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms