RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MCRIP1C9JLW8 97 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 IFNA2P01563 188 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 IFNA17P01571 189 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CDK4P11802 303 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 PIGAP37287 484 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SLC6A12P48065 614 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TGM4P49221 684 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 MEOX1P50221 254 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ACVR1Q04771 509 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 LTBQ06643 244 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 EIF3IQ13347 325 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 MAVSQ7Z434 540 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR52N5Q8NH56 324 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 EMG1Q92979 244 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 FKRPQ9H9S5 495 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CNOT11Q9UKZ1 510 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 CCDC163A0A0D9SF12 145 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ACOD1A6NK06 481 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SHISA8B8ZZ34 492 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF195O14628 629 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SGCEO43556 437 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HPGDSO60760 199 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 BCAS1O75363 584 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 RP2O75695 350 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 RAB3DO95716 219 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 IFNA7P01567 189 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TFPTP0C1Z6 253 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TEKQ02763 1124 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CRMP1Q14194 572 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ARL6IP1Q15041 203 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF511Q8NB15 262 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR4N2Q8NGD1 307 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR4D6Q8NGJ1 314 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 BRIX1Q8TDN6 353 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 MVB12AQ96EY5 273 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 NIPAL2Q9H841 368 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 INPP5EQ9NRR6 644 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 P4HTMQ9NXG6 502 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SIDT1Q9NXL6 827 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 TAS2R8Q9NYW2 309 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 B3GAT1Q9P2W7 334 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TP53TG5Q9Y2B4 290 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF736B4DX44 427 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 SURF4O15260 269 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 FZD6O60353 706 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PAHP00439 452 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 MT-ATP6P00846 226 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HLA-DMAP28067 261 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PTGER4P35408 488 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 EIF2S3P41091 472 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 BMXP51813 675 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 RPL27P61353 136 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 RPP30P78346 268 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 DPY19L2P1Q6NXN4 242 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HAGHLQ6PII5 290 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 CYHR1Q6ZMK1 362 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 RETREG3Q86VR2 466 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR2A1Q8NGT9 310 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 FNDC8Q8TC99 324 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GGHQ92820 318 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 FGGYQ96C11 551 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HRASLS5Q96KN8 279 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GABRG3Q99928 467 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SELENOIQ9C0D9 397 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PRDM6Q9NQX0 595 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 BABAM2Q9NXR7 383 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PTTG3PQ9NZH4 202 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TNS1Q9HBL0 1735 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 IGHV1OR21-1A0A087WYE8 117 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PPH5 198 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TCRBV3S1A0A5B6 114 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HS3ST1O14792 307 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 FZD7O75084 574 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TSPAN12O95859 305 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 BSGP35613 385 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PPICP45877 212 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CNIH2Q6PI25 160 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 FCRLAQ7L513 359 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 NKAIN4Q8IVV8 208 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GJC3Q8NFK1 279 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR11G2Q8NGC1 345 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PRR7Q8TB68 274 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 UTP4Q969X6 686 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 GIMAP5Q96F15 307 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF582Q96NG8 517 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR2A14Q96R47 310 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SNX18Q96RF0 628 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 LAT2Q9GZY6 243 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OCIAD1Q9NX40 245 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 EHFQ9NZC4 300 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 MRPS28Q9Y2Q9 187 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 FRG2CA6NGY1 282 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HMX3A6NHT5 357 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 F5H0A9 414 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 YES1P07947 543 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 T-ENOLP0DO92 83 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CALCBP10092 127 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 BDKRB2P30411 391 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms