RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 SCOCQ9UIL1 159 aa10.46□□□□□ -0.73
SPARC-207ENST00000537849 EXOGQ9Y2C4 368 aaKnown RBP10.46□□□□□ -0.73
SPARC-207ENST00000537849 MED12LQ86YW9 2145 aa10.46□□□□□ -0.74
SPARC-207ENST00000537849 PIEZO2Q9H5I5 2752 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 SLC22A23A1A5C7 686 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 PRSS37A4D1T9 235 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 TMEM8BA6NDV4 472 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 NPIPA5E9PKD4 350 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 J3QRE1 110 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 MRPS14O60783 128 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 TRMUO75648 421 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 SERPINI2O75830 405 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 MT-ND2P03891 347 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 PAICSP22234 425 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 EEF1B2P24534 225 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 C21orf33P30042 268 aaPredicted RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 EIF1AXP47813 144 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 MTNR1AP48039 350 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 CDH11P55287 796 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 POU3F1Q03052 451 aaPredicted RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 SRYQ05066 204 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 TMED1Q13445 227 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 IRF3Q14653 427 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 MELKQ14680 651 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 NADK2Q4G0N4 442 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 KLHL22Q53GT1 634 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 B3GLCTQ6Y288 498 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 CREB3L2Q70SY1 520 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 AHSA2Q719I0 299 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 PRSS48Q7RTY5 328 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 GID4Q8IVV7 300 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 UEVLDQ8IX04 471 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 GHDCQ8N2G8 530 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 OR9K2Q8NGE7 335 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 OR52I1Q8NGK6 324 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 OR9Q1Q8NGQ5 310 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 KISS1RQ969F8 398 aaPredicted RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 RFKQ969G6 155 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 MYDGFQ969H8 173 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 OTULINQ96BN8 352 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 ZHX1-C8orf76Q96EF9 292 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 RNFT2Q96EX2 444 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 TSSK2Q96PF2 358 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 KCNK17Q96T54 332 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 COPS4Q9BT78 406 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 SF3B5Q9BWJ5 86 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 MRPL13Q9BYD1 178 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 OR51V1Q9H2C8 321 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 SRA1Q9HD15 236 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 TIGARQ9NQ88 270 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 ZNF71Q9NQZ8 489 aaPredicted RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 MED29Q9NX70 200 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 HAO2Q9NYQ3 351 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 VSX1Q9NZR4 365 aaPredicted RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 WARS2Q9UGM6 360 aaKnown RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 TUBD1Q9UJT1 453 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 ING1Q9UK53 422 aaPredicted RBP10.45□□□□□ -0.74
SPARC-207ENST00000537849 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.45□□□□□ -0.74
SPARC-207ENST00000537849 NPIPA1Q9UND3 350 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 PCDHGB1Q9Y5G3 927 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 FREM1Q5H8C1 2179 aa10.45□□□□□ -0.74
SPARC-207ENST00000537849 MAP1BP46821 2468 aaKnown RBP10.44□□□□□ -0.74
SPARC-207ENST00000537849 SLC35F4A4IF30 521 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 A6NIZ1 184 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 SNTNA6NMZ2 147 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 ZNF716A6NP11 495 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 H7C1C5 153 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 DCTN6O00399 190 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 AQP7O14520 342 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 RGS10O43665 173 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 AHCYL1O43865 530 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 CYTIPO60759 359 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 CLPTM1O96005 669 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 RENP00797 406 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 GYPBP06028 91 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 FAM87AP0C7U9 286 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 ATP6V1B1P15313 513 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 ZNF43P17038 809 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 JUNBP17275 347 aaPredicted RBP10.44□□□□□ -0.74
SPARC-207ENST00000537849 SPI1P17947 270 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 PCMT1P22061 227 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 NTF4P34130 210 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 ALDH3B2P48448 385 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 DAP3P51398 398 aaKnown RBP10.44□□□□□ -0.74
SPARC-207ENST00000537849 SLC16A1P53985 500 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 BIDP55957 195 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 RAP1BP61224 184 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 RPS3AP61247 264 aaKnown RBP10.44□□□□□ -0.74
SPARC-207ENST00000537849 LCN6P62502 163 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 RAP1AP62834 184 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 C1DQ13901 141 aaKnown RBP10.44□□□□□ -0.74
SPARC-207ENST00000537849 INAQ16352 499 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 C3AR1Q16581 482 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 KLHL12Q53G59 568 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 LINC01590Q5TEZ4 76 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 EEF1A1P5Q5VTE0 462 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 RNLSQ5VYX0 342 aa10.44□□□□□ -0.74
SPARC-207ENST00000537849 ZNF324BQ6AW86 544 aaPredicted RBP10.44□□□□□ -0.74
SPARC-207ENST00000537849 B3GNT6Q6ZMB0 384 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms