RNA–Protein interactions for RNA: ENST00000537007.5

MRPL48-208, Transcript of mitochondrial ribosomal protein L48, human

TSL 3

Gene MRPL48, Length 287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-208	ENST00000537007	UGT1A6	P19224	532 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PDHA2	P29803	388 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	HSPA9	P38646	679 aa	Known RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	MNDA	P41218	407 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	STAR	P49675	285 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	VEGFC	P49767	419 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	SEC61A1	P61619	476 aa	Known RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	GALK2	Q01415	458 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ZNF415	Q09FC8	603 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	RASGEF1B	Q0VAM2	473 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	CETN1	Q12798	172 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TRAF3	Q13114	568 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	DPYS	Q14117	519 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TRADD	Q15628	312 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PHKG1	Q16816	387 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ODF4	Q2M2E3	257 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ANKDD1A	Q495B1	522 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PTPN20	Q4JDL3	420 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PHLDA2	Q53GA4	152 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TEX35	Q5T0J7	233 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	SLC22A10	Q63ZE4	541 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	OR2A2	Q6IF42	318 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	DUX4L9	Q6RFH8	374 aa	Predicted RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	SCIMP	Q6UWF3	145 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	GPR141	Q7Z602	305 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	YRDC	Q86U90	279 aa	Known RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	LCA5	Q86VQ0	697 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TMEM219	Q86XT9	240 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TMEM139	Q8IV31	216 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	LAX1	Q8IWV1	398 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ODF3L1	Q8IXM7	274 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	FAM71A	Q8IYT1	594 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	CLIP4	Q8N3C7	705 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PRR26	Q8N8Z3	221 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	LINC01555	Q8NAE3	123 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	SDR9C7	Q8NEX9	313 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	B3GNT7	Q8NFL0	401 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	STEAP2	Q8NFT2	490 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	OR4S1	Q8NGB4	309 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ZNF606	Q8WXB4	792 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TFG	Q92734	400 aa	Predicted RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	NCLN	Q969V3	563 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	FAM46B	Q96A09	425 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	SLCO4A1	Q96BD0	722 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ULK4	Q96C45	1275 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ISOC1	Q96CN7	298 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	FBXO17	Q96EF6	278 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	SLC47A1	Q96FL8	570 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TMEM19	Q96HH6	336 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	OXNAD1	Q96HP4	312 aa	Predicted RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	NSMCE2	Q96MF7	247 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TSSK2	Q96PF2	358 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ATOH8	Q96SQ7	321 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	CCDC77	Q9BR77	488 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	TDRD1	Q9BXT4	1180 aa	Known RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PANK2	Q9BZ23	570 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	CHIA	Q9BZP6	476 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	MMP28	Q9H239	520 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	CENPH	Q9H3R5	247 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	RWDD1	Q9H446	243 aa	Predicted RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	C10orf88	Q9H8K7	445 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	MARCH7	Q9H992	704 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	COG4	Q9H9E3	785 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	UGT1A10	Q9HAW8	530 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	FAM120C	Q9NX05	1096 aa	Known RBP	2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	PLEK2	Q9NYT0	353 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	ZNF224	Q9NZL3	707 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	DUX4	Q9UBX2	424 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	CIDEB	Q9UHD4	219 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	RSPH14	Q9UHP6	348 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	NUP50	Q9UKX7	468 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	DLGAP4	Q9Y2H0	992 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	RNF213	Q63HN8	5207 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	HMCN2	Q8NDA2	5059 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	DNAH11	Q96DT5	4516 aa		2.18	□□□□□ -2.06
MRPL48-208	ENST00000537007	FAT2	Q9NYQ8	4349 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	KIAA2026	Q5HYC2	2103 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	TRAV18	A0A075B6X5	111 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	IGHV3OR16-10	A0A075B7F0	116 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	UQCRHL	A0A096LP55	91 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007		A0A1B0GVY2	172 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	CTAGE9	A4FU28	777 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	ANKDD1B	A6NHY2	528 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	ZNF587B	E7ETH6	402 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	ARPC2	O15144	300 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	MED7	O43513	233 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	SCO2	O43819	266 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	RDH16	O75452	317 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	DEDD	O75618	318 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	ZFAND5	O76080	213 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	MYO1D	O94832	1006 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	MPZL1	O95297	269 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	PMS2P2	O95744	297 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	PTBP3	O95758	552 aa	Known RBP	2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	ACTL6A	O96019	429 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	IFNW1	P05000	195 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	FH	P07954	510 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	CTAGE8	P0CG41	777 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	KRT3	P12035	628 aa		2.17	□□□□□ -2.06
MRPL48-208	ENST00000537007	SKIL	P12757	684 aa		2.17	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms