RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 RORAP35398 523 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 SCAND1P57086 179 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 EGR3Q06889 387 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 LGALSLQ3ZCW2 172 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 SEZ6L2Q6UXD5 910 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF563Q8TA94 476 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 C17orf50Q8WW18 174 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 KTI12Q96EK9 354 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 CHRNA10Q9GZZ6 450 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 NXF5Q9H1B4 397 aaKnown RBP14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 WDR76Q9H967 626 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 PDE7BQ9NP56 450 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 FBXL3Q9UKT7 428 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 CEP290O15078 2479 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 A0A1B0GUH1 482 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 ACOT7O00154 380 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 KHDRBS3O75525 346 aaKnown RBP14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 RENP00797 406 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 ADRA2CP18825 462 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 TACR3P29371 465 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 SLC6A8P48029 635 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 RIPPLY1Q0D2K3 151 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM255AQ5JRV8 349 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 LRRTM1Q86UE6 522 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 SDR16C5Q8N3Y7 309 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 C7orf57Q8NEG2 295 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 GCDHQ92947 438 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 CLIP3Q96DZ5 547 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 LCORQ96JN0 433 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 KLHL15Q96M94 604 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 LAT2Q9GZY6 243 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 FKRPQ9H9S5 495 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 BEX1Q9HBH7 125 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 TAS2R10Q9NYW0 307 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 FLVCR2Q9UPI3 526 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 LILRA5A6NI73 299 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 OR4C45A6NMZ5 311 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 HSPB2A8KAH6 182 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 GLULP15104 373 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 CDK2P24941 298 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 P2RX1P51575 399 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 ZP1P60852 638 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 HSPB2Q16082 182 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 MESTQ5EB52 335 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 EEF1A1P5Q5VTE0 462 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 OLFML2AQ68BL7 652 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 OR2G2Q8NGZ5 317 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF417Q8TAU3 575 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 TAAR8Q969N4 342 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 NXPE2Q96DL1 559 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 TSPAN32Q96QS1 320 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 COMMD4Q9H0A8 199 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 NOX3Q9HBY0 568 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 NPDC1Q9NQX5 325 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 PNO1Q9NRX1 252 aaKnown RBP14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 LANCL2Q9NS86 450 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 SOHLH2Q9NX45 425 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 IKZF2Q9UKS7 526 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 MMACHCQ9Y4U1 282 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 FKBP7Q9Y680 259 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 SLCO1B1Q9Y6L6 691 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 SEC16AO15027 2179 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 ALPK2Q86TB3 2170 aa14.55□□□□□ -0.08
CHMP1A-202ENST00000535997 A0A087WV48 116 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 LINC00862A6NCI5 91 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 FRG2CA6NGY1 282 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 SHISA7A6NL88 538 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM212A6NML5 194 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 LEUTXA8MZ59 168 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 PHYHO14832 338 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 LCN1P31025 176 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 LTBRP36941 435 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 SOX2P48431 317 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 STPG1Q5TH74 334 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 DNM1P46Q6ZS02 220 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 DPY19L4Q7Z388 723 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM151BQ8IW70 566 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF321PQ8N8H1 164 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 OR2T35Q8NGX2 323 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 GPR148Q8TDV2 347 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF524Q96C55 264 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 ADOQ96SZ5 270 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 OR10A4Q9H209 315 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 EPHA6Q9UF33 1036 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 TRBV5-7A0A0A0MS05 114 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 ARPC4-TTLL3A0A0A6YYG9 625 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 IGHV5-51A0A0C4DH38 117 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 TVP23AA6NH52 213 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 CPN1P15169 458 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 VEGFCP49767 419 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 EPHA4P54764 986 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 RASGEF1BQ0VAM2 473 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF676Q8N7Q3 588 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 OR8D2Q9GZM6 311 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 CLEC4MQ9H2X3 399 aaPredicted RBP14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 METTL17Q9H7H0 456 aaPredicted RBP14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 EIF3KQ9UBQ5 218 aaKnown RBP14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 THADAQ6YHU6 1953 aa14.54□□□□□ -0.08
CHMP1A-202ENST00000535997 A0A1W2PQ72 361 aa14.53□□□□□ -0.08
CHMP1A-202ENST00000535997 TLCD2A6NGC4 264 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms