RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 GNPDA2Q8TDQ7 276 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 ZFAND2BQ8WV99 257 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 ITFG2Q969R8 447 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 SPOCK3Q9BQ16 436 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 NTN4Q9HB63 628 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 ASB6Q9NWX5 421 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 UPB1Q9UBR1 384 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 PKDREJQ9NTG1 2253 aa10.64□□□□□ -0.71
CHD4-203ENST00000535717 NPIPB13A6NJU9 1138 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 OR6C65A6NJZ3 312 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ZNF726A6NNF4 738 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 NPIPB4C9JG80 1138 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 MCIDASD6RGH6 385 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 PDLIM1O00151 329 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 HNRNPRO43390 633 aaKnown RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 AKAP8O43823 692 aaKnown RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 DEAF1O75398 565 aaPredicted RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 LYZL6O75951 148 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 BCL10O95999 233 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 PSMB1P20618 241 aaKnown RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 COX5AP20674 150 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 PAX7P23759 505 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 DNAJA1P31689 397 aaKnown RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 CTXN1P60606 82 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 PRPS1P60891 318 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 TSPAN31Q12999 210 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ITGADQ13349 1161 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 CAMK2DQ13557 499 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ATP6AP1Q15904 470 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ACKR1Q16570 336 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 PHYHD1Q5SRE7 291 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ARMC4Q5T2S8 1044 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 SFRP5Q5T4F7 317 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ANKRD34AQ69YU3 496 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 THSD4Q6ZMP0 1018 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 C20orf196Q8IYI0 205 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ZNF433Q8N7K0 673 aaPredicted RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 AQP11Q8NBQ7 271 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 OR10G2Q8NGC3 310 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 OR6X1Q8NH79 312 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 LINC01560Q8TB33 94 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 GIPC3Q8TF64 312 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 PYDC1Q8WXC3 89 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ASB10Q8WXI3 467 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 ADAD1Q96M93 576 aaKnown RBP10.63□□□□□ -0.71
CHD4-203ENST00000535717 LINC00470Q9BZP3 86 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 TXNIPQ9H3M7 391 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 IL20RAQ9UHF4 553 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 GPR52Q9Y2T5 361 aa10.63□□□□□ -0.71
CHD4-203ENST00000535717 TUBAL3A6NHL2 446 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 H3BNX3 289 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ENTPD5O75356 428 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 E2F6O75461 281 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 KRT33AO76009 404 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 NDUFB2O95178 105 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 IGHMP01871 453 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ITGA5P08648 1049 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 COX6B1P14854 86 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 FASP25445 335 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 RPL4P36578 427 aaKnown RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 KIR2DL3P43628 341 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 DAP3P51398 398 aaKnown RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 RPL27P61353 136 aaKnown RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 ERVK-25P63136 954 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ELF3P78545 371 aaPredicted RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 RUNX1T1Q06455 604 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 TOP3AQ13472 1001 aaPredicted RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 C9orf135Q5VTT2 229 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 SMARCD3Q6STE5 483 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 C22orf34Q6ZV56 151 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 BHLHA15Q7RTS1 189 aaPredicted RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 HS3ST5Q8IZT8 346 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 GPR137CQ8N3F9 429 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 FANK1Q8TC84 345 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 LRTOMTQ8WZ04 291 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 KISS1RQ969F8 398 aaPredicted RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 GTPBP3Q969Y2 492 aaKnown RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 SLC25A44Q96H78 314 aaPredicted RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 LRR1Q96L50 414 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 WFIKKN1Q96NZ8 548 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ALKBH3Q96Q83 286 aaPredicted RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 TSPAN32Q96QS1 320 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 FEVQ99581 238 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 KATNB1Q9BVA0 655 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 DGCR6LQ9BY27 220 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ACTR6Q9GZN1 396 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 TAS2R16Q9NYV7 291 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 CRIM1Q9NZV1 1036 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ZNF346Q9UL40 294 aaKnown RBP10.62□□□□□ -0.71
CHD4-203ENST00000535717 MGAT4BQ9UQ53 548 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 ADAM18Q9Y3Q7 739 aa10.62□□□□□ -0.71
CHD4-203ENST00000535717 NBPF19A0A087WUL8 3843 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ARRDC5A6NEK1 342 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 ZNF587BE7ETH6 402 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 RPL36A-HNRNPH2H7BZ11 118 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 M0R3G1 203 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 CD14P08571 375 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 PGA4P0DJD7 388 aa10.61□□□□□ -0.71
CHD4-203ENST00000535717 PGA3P0DJD8 388 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms