RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 GPR139Q6DWJ6 353 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 CCDC71Q8IV32 467 aaPredicted RBP13.81□□□□□ -0.2
CNN1-202ENST00000535659 ARIH2OSQ8N7S6 290 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 OR2T33Q8NG76 320 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 OR6X1Q8NH79 312 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 NRG4Q8WWG1 115 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 ERMAPQ96PL5 475 aaPredicted RBP13.81□□□□□ -0.2
CNN1-202ENST00000535659 TSPAN32Q96QS1 320 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 RNF6Q9Y252 685 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 RCE1Q9Y256 329 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 ADAM18Q9Y3Q7 739 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 PHF3Q92576 2039 aaKnown RBP13.81□□□□□ -0.2
CNN1-202ENST00000535659 ARHGAP21Q5T5U3 1957 aa13.81□□□□□ -0.2
CNN1-202ENST00000535659 BHLHE40O14503 412 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 IMPA2O14732 288 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 AKAP8O43823 692 aaKnown RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 PPP1R3DO95685 299 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 TXNDC12O95881 172 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 CGAP01215 116 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 CDH2P19022 906 aaPredicted RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 ACVR1BP36896 505 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 POLR2IP36954 125 aaKnown RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 SELENOPP49908 381 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 CDK5Q00535 292 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 NPRL3Q12980 569 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 TOP3AQ13472 1001 aaPredicted RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 PTGES3Q15185 160 aaKnown RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 NIPAL3Q6P499 406 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 VWA1Q6PCB0 445 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 FAM122BQ7Z309 247 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 ZNF100Q8IYN0 542 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 LNX2Q8N448 690 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 Q96M85 177 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 C12orf49Q9H741 205 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 COQ3Q9NZJ6 369 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 BAIAP2Q9UQB8 552 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 MED12LQ86YW9 2145 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 A6NIZ1 184 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 DVL2O14641 736 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 NOS3P29474 1203 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 SDHAP31040 664 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 OR3A2P47893 321 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 SMSP52788 366 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 RAP1BP61224 184 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 RAP1AP62834 184 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 MYBPC1Q00872 1141 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 CAMK2DQ13557 499 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 MELKQ14680 651 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 ZIK1Q3SY52 487 aaPredicted RBP13.8□□□□□ -0.2
CNN1-202ENST00000535659 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 FAM205BPQ63HN1 556 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 ACSM5Q6NUN0 579 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 SLC27A4Q6P1M0 643 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 CASP12Q6UXS9 341 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 HDDC2Q7Z4H3 204 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 LIX1LQ8IVB5 337 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 WDFY1Q8IWB7 410 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 APH1AQ96BI3 265 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 ZNF570Q96NI8 536 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 OR2M2Q96R28 347 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 GABARAPL3Q9BY60 117 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 PROCRQ9UNN8 238 aa13.8□□□□□ -0.2
CNN1-202ENST00000535659 MAST4O15021 2626 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 DOCK7Q96N67 2140 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 SLC43A1O75387 559 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 CD8BP10966 210 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 ACADSP16219 412 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 BMP5P22003 454 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 EPHA2P29317 976 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 PTDSS1P48651 473 aaKnown RBP13.79□□□□□ -0.2
CNN1-202ENST00000535659 RUNX1T1Q06455 604 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 TMEM236Q5W0B7 351 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 TMEM123Q8N131 208 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 ZNF610Q8N9Z0 462 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 OR4Q3Q8NH05 313 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 ZNF519Q8TB69 540 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 ASB5Q8WWX0 329 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 ZNF566Q969W8 418 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 LRR1Q96L50 414 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 RDH12Q96NR8 316 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 MRPL13Q9BYD1 178 aaKnown RBP13.79□□□□□ -0.2
CNN1-202ENST00000535659 VCXQ9H320 206 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 PIGMQ9H3S5 423 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 RIBC2Q9H4K1 309 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 MYO18BQ8IUG5 2567 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 MYO7BQ6PIF6 2116 aa13.79□□□□□ -0.2
CNN1-202ENST00000535659 TEX13CA0A0J9YWL9 993 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 OR6C65A6NJZ3 312 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 XKRYO14609 159 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 ARHGEF9O43307 516 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 TRMUO75648 421 aaKnown RBP13.78□□□□□ -0.2
CNN1-202ENST00000535659 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNN1-202ENST00000535659 SNAP29O95721 258 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 HMGN1P05114 100 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 EDNRAP25101 427 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 CHRNB4P30926 498 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 SLC35F1Q5T1Q4 408 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms