RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CPSF4LA6NMK7 179 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 LRRN3E7EW58 273 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 ERCC1P07992 297 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 ADORA3P0DMS8 318 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 CD79AP11912 226 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 NPR2P20594 1047 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 PCGF2P35227 344 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 THBS4P35443 961 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 PPOXP50336 477 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 HGFACQ04756 655 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 GGTLC2Q14390 218 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 ENTPD8Q5MY95 495 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 TTC33Q6PID6 262 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF813Q6ZN06 617 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 CXXC5Q7LFL8 322 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 MYPOPQ86VE0 399 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 GPR32P1Q8NGA4 272 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 OR10A6Q8NH74 314 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 VANGL1Q8TAA9 524 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 CDC42EP3Q9UKI2 254 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 MXRA5Q9NR99 2828 aa14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 FBN1P35555 2871 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-204ENST00000535313 C11orf98E9PRG8 122 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 hCG_2039718K7EN88 272 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 ATP8B1O43520 1251 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 HLA-HP01893 362 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 NR4A2P43354 598 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 CSNK1A1P48729 337 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 GZMKP49863 264 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 CYLC2Q14093 348 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 DAG1Q14118 895 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 NPTX1Q15818 432 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 GSG1Q2KHT4 349 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 LINC00114Q6XXX2 140 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 SPATA21Q7Z572 469 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF540Q8NDQ6 660 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 ADAMTS16Q8TE57 1224 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 RASSF5Q8WWW0 418 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 NANSQ9NR45 359 aa14.02□□□□□ -0.17
CLSTN3-204ENST00000535313 TRAPPC13A5PLN9 417 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 VWC2LB2RUY7 222 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 CH25HO95992 272 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 HIST1H2ABP04908 130 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 IGHV4-31P0DP07 118 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 IFNGR1P15260 489 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 B4GALT1P15291 398 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 CD247P20963 164 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 BIDP55957 195 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 PIGFQ07326 219 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 SNTB2Q13425 540 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF74Q16587 644 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 VMACQ2NL98 169 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 TRMT5Q32P41 509 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 IQCCQ4KMZ1 466 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 KRT80Q6KB66 452 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 NHLRC1Q6VVB1 395 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 WDR88Q6ZMY6 472 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 HIST3H2AQ7L7L0 130 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF627Q7L945 461 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 RBM45Q8IUH3 476 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 SVOPLQ8N434 492 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 SPATA3Q8NHX4 192 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 HIST1H2ACQ93077 130 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 TAMM41Q96BW9 452 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 MPP4Q96JB8 637 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 FOXN4Q96NZ1 517 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 FOXB1Q99853 325 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 SH3GL1Q99961 368 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 BEX2Q9BXY8 128 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 NOX3Q9HBY0 568 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 DYNLRB1Q9NP97 96 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 MRGBPQ9NV56 204 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 TMEM160Q9NX00 188 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 B3GNT2Q9NY97 397 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 SLC7A7Q9UM01 511 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 SPEF1Q9Y4P9 236 aa14.01□□□□□ -0.17
CLSTN3-204ENST00000535313 KPNA4O00629 521 aaPredicted RBP14□□□□□ -0.17
CLSTN3-204ENST00000535313 RNF13O43567 381 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 ENTPD5O75356 428 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 RAB36O95755 333 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 FAM157CP0CG43 387 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 APEHP13798 732 aaKnown RBP14□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF16P17020 682 aaPredicted RBP14□□□□□ -0.17
CLSTN3-204ENST00000535313 NR4A1P22736 598 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 PTDSS1P48651 473 aaKnown RBP14□□□□□ -0.17
CLSTN3-204ENST00000535313 SLC35D2Q76EJ3 337 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 OR4D11Q8NGI4 311 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 OR6X1Q8NH79 312 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 NEU4Q8WWR8 484 aaPredicted RBP14□□□□□ -0.17
CLSTN3-204ENST00000535313 DOK1Q99704 481 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 SLC19A3Q9BZV2 496 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
CLSTN3-204ENST00000535313 LPAR3Q9UBY5 353 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 ZNF229Q9UJW7 825 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 FBXL3Q9UKT7 428 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 CMAHPQ9Y471 501 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 STAB1Q9NY15 2570 aa14□□□□□ -0.17
CLSTN3-204ENST00000535313 SH3PXD2BA1X283 911 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms