RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 ITGA5P08648 1049 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 ALDOCP09972 364 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 TFPIP10646 304 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 LBPP18428 481 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 GGT1P19440 569 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 PTNP21246 168 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 RPS4Y1P22090 263 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 FKBP2P26885 142 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 S100A3P33764 101 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 CHI3L1P36222 383 aaPredicted RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 CDKN2CP42773 168 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 IDH2P48735 452 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 CLK1P49759 484 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 KHKP50053 298 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 CLNS1AP54105 237 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 CDH11P55287 796 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 NME5P56597 212 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 OR2B6P58173 313 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 UFM1P61960 85 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 VEZF1Q14119 521 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 HABP2Q14520 560 aaPredicted RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 MAPK11Q15759 364 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 ETFDHQ16134 617 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 SYPL1Q16563 259 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 KRT71Q3SY84 523 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 FAM174BQ3ZCQ3 159 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 GPAT3Q53EU6 434 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 C11orf71Q6IPW1 123 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 LRRC74BQ6ZQY2 392 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 SSX8Q7RTT4 187 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 GRINAQ7Z429 371 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 RNF130Q86XS8 419 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 LRRC34Q8IZ02 419 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 ARFGAP2Q8N6H7 521 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 ANKFN1Q8N957 763 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 WDR31Q8NA23 367 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 VPS37AQ8NEZ2 397 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 OR52N5Q8NH56 324 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 ZNF563Q8TA94 476 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 MUS81Q96NY9 551 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 TRNT1Q96Q11 434 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 SLC35A5Q9BS91 424 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 INPP5KQ9BT40 448 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 PARD6BQ9BYG5 372 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 SLC38A1Q9H2H9 487 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 GPR35Q9HC97 309 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 EXOSC3Q9NQT5 275 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 AIG1Q9NVV5 245 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 RLIMQ9NVW2 624 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 EMC3Q9P0I2 261 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 TMEM181Q9P2C4 612 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 RNF7Q9UBF6 113 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 MARCOQ9UEW3 520 aaPredicted RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATM-224ENST00000534625 BTNL2Q9UIR0 455 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 OSGIN1Q9UJX0 560 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 TRAPPC4Q9Y296 219 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 B3GALT5Q9Y2C3 310 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 NOSIPQ9Y314 301 aaKnown RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 SLC25A15Q9Y619 301 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 V9GYY5 206 aaPredicted RBP4.52□□□□□ -1.69
ATM-224ENST00000534625 CUBNO60494 3623 aa4.52□□□□□ -1.69
ATM-224ENST00000534625 NBEAL1Q6ZS30 2694 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 SVEP1Q4LDE5 3571 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 TMED7-TICAM2A0A0A6YYA0 188 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 A0A1W2PR80 420 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 CIB4A0PJX0 185 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 CCT8L1PA6NM43 557 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 F5H697 171 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 FAAHO00519 579 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 GPR171O14626 319 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 MRPL33O75394 65 aaKnown RBP4.51□□□□□ -1.69
ATM-224ENST00000534625 RAD51DO75771 328 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 CCNA2P20248 432 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 PTAFRP25105 342 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 TACR3P29371 465 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 TTKP33981 857 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
ATM-224ENST00000534625 SLC1A3P43003 542 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 MAGEA8P43361 318 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 HTR3AP46098 478 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 ZNF83P51522 516 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 POLR2HP52434 150 aaKnown RBP4.51□□□□□ -1.69
ATM-224ENST00000534625 MVDP53602 400 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 IRX1P78414 480 aaPredicted RBP4.51□□□□□ -1.69
ATM-224ENST00000534625 DMTNQ08495 405 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 SPOCK1Q08629 439 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 BST1Q10588 318 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 EPS8Q12929 822 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 STX3Q13277 289 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 SLC17A1Q14916 467 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 GABRA6Q16445 453 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 AGAP6Q5VW22 663 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 B3GLCTQ6Y288 498 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 ZNF621Q6ZSS3 439 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 SPATA19Q7Z5L4 167 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 UBE2J2Q8N2K1 259 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 ZIC4Q8N9L1 334 aa4.51□□□□□ -1.69
ATM-224ENST00000534625 OR52E4Q8NGH9 312 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms