RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 TMEM155Q4W5P6 130 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 ZNF385BQ569K4 471 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 NOXRED1Q6NXP6 359 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 EIF3MQ7L2H7 374 aaKnown RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 CCDC91Q7Z6B0 441 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 EPHX4Q8IUS5 362 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 LYG1Q8N1E2 194 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 CPEB3Q8NE35 698 aaKnown RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 FAM71CQ8NEG0 241 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 MUC7Q8TAX7 377 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 CFHR4Q92496 578 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 PMM1Q92871 262 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 FAM120BQ96EK7 910 aaKnown RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 DCLRE1CQ96SD1 692 aaKnown RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 SSBP3Q9BWW4 388 aaPredicted RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 OR51B6Q9H340 312 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 GPR35Q9HC97 309 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 MBNL3Q9NUK0 354 aaKnown RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 NKX1-2Q9UD57 310 aaPredicted RBP5.38□□□□□ -1.55
CD44-237ENST00000534082 KCNE5Q9UJ90 142 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 TMCO1Q9UM00 188 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 LRCH1Q9Y2L9 728 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 TMED7Q9Y3B3 224 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 KCNE3Q9Y6H6 103 aa5.38□□□□□ -1.55
CD44-237ENST00000534082 ABCA13Q86UQ4 5058 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 TANC2Q9HCD6 1990 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 LIPT2A6NK58 231 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 E9PQ18 207 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 POC1B-GALNT4F8VUJ3 575 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 PGRMC1O00264 195 aaKnown RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 ZNF208O43345 1280 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 SPRY3O43610 288 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 VAMP5O95183 116 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 IGHV1-46P01743 117 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GPIP06744 558 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 CHRM4P08173 479 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 THRBP10828 461 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 EFNA1P20827 205 aaPredicted RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 DRD4P21917 467 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 PGM1P36871 562 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 HTR3AP46098 478 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GIPRP48546 466 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 P2RY4P51582 365 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 POLR2HP52434 150 aaKnown RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 FGF12P61328 243 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 ERVS71-1P61550 626 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GNB2P62879 340 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 IKZF1Q13422 519 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GPR68Q15743 365 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 ZNF141Q15928 474 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 NSUN5P1Q3KNT7 163 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 TMEM225Q6GV28 225 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 PGBD2Q6P3X8 592 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 C6orf89Q6UWU4 347 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GPRIN3Q6ZVF9 776 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 LDLRAD3Q86YD5 345 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 EGFL6Q8IUX8 553 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GPR137CQ8N3F9 429 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GALNT4Q8N4A0 578 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 METTL6Q8TCB7 284 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 DCAKDQ8WVC6 231 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 GEMIN6Q8WXD5 167 aaKnown RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 RAB40AQ8WXH6 277 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 LRTOMTQ8WZ04 291 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 DACT3Q96B18 629 aaPredicted RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 PPCDCQ96CD2 204 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 R3HDM4Q96D70 268 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 RBMXL1Q96E39 390 aaKnown RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 ZNF764Q96H86 408 aaPredicted RBP5.37□□□□□ -1.55
CD44-237ENST00000534082 EGLN2Q96KS0 407 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 ACTRT3Q9BYD9 372 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 EGLN1Q9GZT9 426 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 MMP28Q9H239 520 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 NANOGQ9H9S0 305 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 ADPRHL2Q9NX46 363 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 OSGIN1Q9UJX0 560 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 FBXL3Q9UKT7 428 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 FOXJ3Q9UPW0 622 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 RCE1Q9Y256 329 aa5.37□□□□□ -1.55
CD44-237ENST00000534082 ZSCAN5BA6NJL1 495 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 A8MT66 165 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 CEACAM18A8MTB9 384 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 AP3D1O14617 1153 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 TP73O15350 636 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 ZNF500O60304 480 aaPredicted RBP5.36□□□□□ -1.55
CD44-237ENST00000534082 SCN2BO60939 215 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 UGT2B17O75795 530 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 SEC31AO94979 1220 aaKnown RBP5.36□□□□□ -1.55
CD44-237ENST00000534082 LCKP06239 509 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 KRT16P08779 473 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 NHLRC4P0CG21 123 aaPredicted RBP5.36□□□□□ -1.55
CD44-237ENST00000534082 B4GALT1P15291 398 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 UQCRC2P22695 453 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 TACR3P29371 465 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 GABRA5P31644 462 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 HSD17B3P37058 310 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 FRKP42685 505 aaPredicted RBP5.36□□□□□ -1.55
CD44-237ENST00000534082 IER3P46695 156 aa5.36□□□□□ -1.55
CD44-237ENST00000534082 IDH2P48735 452 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms