RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 FZR1Q9UM11 496 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 A4GNTQ9UNA3 340 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CORO2BQ9UQ03 480 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 AMDHD2Q9Y303 409 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 IGHV2OR16-5A0A0B4J2B6 119 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 TRAPPC13A5PLN9 417 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 PRORSD1PA6NEY8 169 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 RPL36A-HNRNPH2H7BZ11 118 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 SLC43A1O75387 559 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 VAMP5O95183 116 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 ASAH2BP0C7U1 165 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 TROVE2P10155 538 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSBP3-215ENST00000533946 MAKP20794 623 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 GTF2E2P29084 291 aaKnown RBP8.34□□□□□ -1.07
SSBP3-215ENST00000533946 KDELR2P33947 212 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 MSX2P35548 267 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-215ENST00000533946 AQP2P41181 271 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 NCALDP61601 193 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 LIPEQ05469 1076 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 FMODQ06828 376 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 PUDPQ08623 228 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 CYLC2Q14093 348 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-215ENST00000533946 MMEL1Q495T6 779 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM255AQ5JRV8 349 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 HMBOX1Q6NT76 420 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF613Q6PF04 617 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 KLHL17Q6TDP4 642 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 SLC35D2Q76EJ3 337 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 PATL1Q86TB9 770 aaKnown RBP8.34□□□□□ -1.07
SSBP3-215ENST00000533946 IGFN1Q86VF2 1251 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 RANBP3LQ86VV4 465 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-215ENST00000533946 GPR137CQ8N3F9 429 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 RNF148Q8N7C7 305 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 SYT14Q8NB59 555 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 OR10H5Q8NGA6 315 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 OR8J3Q8NGG0 315 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 OR5J2Q8NH18 312 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 TPD52L3Q96J77 140 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF347Q96SE7 839 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 SH3GL3Q99963 347 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 ECSITQ9BQ95 431 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 BDH2Q9BUT1 245 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 PCDHAC1Q9H158 963 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 SELENONQ9NZV5 590 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 SLC13A4Q9UKG4 626 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 RCE1Q9Y256 329 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 CAPN7Q9Y6W3 813 aa8.34□□□□□ -1.07
SSBP3-215ENST00000533946 ARPC4-TTLL3A0A0A6YYG9 625 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SH3PXD2BA1X283 911 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 BLOC1S5-TXNDC5H3BN57 136 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 OR2T1O43869 369 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 FMO6PO60774 539 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 DIRAS1O95057 198 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 IGKV3-15P01624 115 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SCG5P05408 212 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 C8BP07358 591 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 OR4A8P0C604 315 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 DRD4P21917 467 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 CDAP32320 146 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 CAPZA2P47755 286 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 GIPRP48546 466 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 GSK3BP49841 420 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SLC7A2P52569 658 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 ERVS71-1P61550 626 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SRSF2Q01130 221 aaKnown RBP8.33□□□□□ -1.08
SSBP3-215ENST00000533946 RPL18Q07020 188 aaKnown RBP8.33□□□□□ -1.08
SSBP3-215ENST00000533946 RAB39AQ14964 217 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 AGAP6Q5VW22 663 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 KRT80Q6KB66 452 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF813Q6ZN06 617 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 PXKQ7Z7A4 578 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 CDK20Q8IZL9 346 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 FBXL14Q8N1E6 418 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SVOPLQ8N434 492 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 C17orf78Q8N4C9 275 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 ARIH2OSQ8N7S6 290 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SCAIQ8N9R8 606 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 ADPRHL1Q8NDY3 354 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 SLC26A7Q8TE54 656 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 GTF3AQ92664 365 aaKnown RBP8.33□□□□□ -1.08
SSBP3-215ENST00000533946 TSPAN32Q96QS1 320 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 FAM107BQ9H098 131 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 MYLK2Q9H1R3 596 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 OR51B6Q9H340 312 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 CA10Q9NS85 328 aa8.33□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF99A8MXY4 864 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 FAM220BPB1ANY3 271 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 RNF13O43567 381 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 PRSS23O95084 383 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 SLC2A10O95528 541 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 PGA4P0DJD7 388 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 PGA3P0DJD8 388 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 CD79AP11912 226 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 CBR1P16152 277 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 ZNF14P17017 642 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 TCN1P20061 433 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 IL2RGP31785 369 aa8.32□□□□□ -1.08
SSBP3-215ENST00000533946 APOBEC3AP31941 199 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-215ENST00000533946 TAS2R41P59536 307 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms