RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	OR4C3	Q8NH37	302 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	OR4K13	Q8NH42	304 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ERMAP	Q96PL5	475 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	ZFYVE21	Q9BQ24	234 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	OR51V1	Q9H2C8	321 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	FN3KRP	Q9HA64	309 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	MMP25	Q9NPA2	562 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	IGKV3D-11	A0A0A0MRZ8	115 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897		A0A1W2PPK0	400 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	FITM1	A5D6W6	292 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	OR14I1	A6ND48	311 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897		H0Y8X5	98 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ARPC1B	O15143	372 aa	Known RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	KRT33A	O76009	404 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	AKR7A3	O95154	331 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	IL2RA	P01589	272 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	IGLV3-19	P01714	112 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	BGLAP	P02818	100 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	BMP7	P18075	431 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	PRKACB	P22694	351 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	NFYA	P23511	347 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	LCN1	P31025	176 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SDHA	P31040	664 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SEC61A1	P61619	476 aa	Known RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	DCD	P81605	110 aa	Known RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	ALKBH1	Q13686	389 aa	Known RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	KLHL12	Q53G59	568 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	HES5	Q5TA89	166 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	KRT74	Q7RTS7	529 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	MUC20	Q8N307	709 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	FTMT	Q8N4E7	242 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	OR4C16	Q8NGL9	310 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SYNPR	Q8TBG9	265 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SSC4D	Q8WTU2	575 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SLC22A18	Q96BI1	424 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	RBCK1	Q9BYM8	510 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	RNF208	Q9H0X6	261 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SLC25A18	Q9H1K4	315 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SLC2A8	Q9NY64	477 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	ZNF107	Q9UII5	783 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	ZNF222	Q9UK12	451 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	IGLV1-36	A0A0B4J1U3	117 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897		A0A1B0GTH9	108 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	GGT3P	A6NGU5	568 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ACOT7	O00154	380 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SLC35G6	P0C7Q6	338 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	CTNNB1	P35222	781 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ID2	Q02363	134 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ZNF345	Q14585	488 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	MELK	Q14680	651 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	PXDC1	Q5TGL8	231 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	LIPN	Q5VXI9	398 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ZNF776	Q68DI1	518 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	JMJD6	Q6NYC1	403 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	MAMSTR	Q6ZN01	415 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	COX18	Q8N8Q8	333 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	DNAAF1	Q8NEP3	725 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	OR6M1	Q8NGM8	313 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	OR5M1	Q8NGP8	315 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	GRHL3	Q8TE85	626 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	DOK4	Q8TEW6	326 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SCARB1	Q8WTV0	552 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	PCNP	Q8WW12	178 aa	Known RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	ADIPOR1	Q96A54	375 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	C4orf45	Q96LM5	186 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ARPC5L	Q9BPX5	153 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	ALG12	Q9BV10	488 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	CHST6	Q9GZX3	395 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	CHRNA10	Q9GZZ6	450 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	MRPL22	Q9NWU5	206 aa	Known RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	WSB2	Q9NYS7	404 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	VSX1	Q9NZR4	365 aa	Predicted RBP	4	□□□□□ -1.77
CTSC-208	ENST00000533897	LRIT1	Q9P2V4	623 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	EPHA6	Q9UF33	1036 aa		4	□□□□□ -1.77
CTSC-208	ENST00000533897	SERINC4	A6NH21	518 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	CEACAM18	A8MTB9	384 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	ABCD4	O14678	606 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	PNP	P00491	289 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	IGKV3-11	P04433	115 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	SLC25A4	P12235	298 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	MYOG	P15173	224 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	TFF2	Q03403	129 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	ATRAID	Q6UW56	229 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	C3P1	Q6ZMU1	363 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	TMUB2	Q71RG4	321 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	RRM2B	Q7LG56	351 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	C17orf82	Q86X59	251 aa	Predicted RBP	3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	ZNF441	Q8N8Z8	693 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	CAMKV	Q8NCB2	501 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	DMBX1	Q8NFW5	382 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	OR13C8	Q8NGS7	320 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	OR2G2	Q8NGZ5	317 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	EDA	Q92838	391 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	NACC2	Q96BF6	587 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	SGTB	Q96EQ0	304 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	LMF1	Q96S06	567 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	MNT	Q99583	582 aa		3.99	□□□□□ -1.77
CTSC-208	ENST00000533897	OR10A4	Q9H209	315 aa		3.99	□□□□□ -1.77

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