RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 ACVR1BP36896 505 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 SELENOPP49908 381 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 DAP3P51398 398 aaKnown RBP10.56□□□□□ -0.72
COMMD9-208ENST00000533643 RPS6KA3P51812 740 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 BIDP55957 195 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 RUNX1T1Q06455 604 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 MELKQ14680 651 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 PTGES3Q15185 160 aaKnown RBP10.56□□□□□ -0.72
COMMD9-208ENST00000533643 HSPB2Q16082 182 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 PGGHGQ32M88 737 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 GPR139Q6DWJ6 353 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 SLC27A4Q6P1M0 643 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 AAED1Q7RTV5 226 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 BTLAQ7Z6A9 289 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 TMEM123Q8N131 208 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 ARIH2OSQ8N7S6 290 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 CNEP1R1Q8N9A8 125 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 OR2T33Q8NG76 320 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 OR6X1Q8NH79 312 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 RND1Q92730 232 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 RASD2Q96D21 266 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 STARD4Q96DR4 205 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 ZNF570Q96NI8 536 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 RDH12Q96NR8 316 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 GRIP2Q9C0E4 1043 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 SLC25A19Q9HC21 320 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 PARPBPQ9NWS1 579 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 SMPD3Q9NY59 655 aaPredicted RBP10.56□□□□□ -0.72
COMMD9-208ENST00000533643 GRHPRQ9UBQ7 328 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 BAIAP2Q9UQB8 552 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 RCE1Q9Y256 329 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 EMC9Q9Y3B6 208 aa10.56□□□□□ -0.72
COMMD9-208ENST00000533643 TEX13CA0A0J9YWL9 993 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 A6NIZ1 184 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 ZNF726A6NNF4 738 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 PYCARD-AS1I3L0S3 204 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 MRPL33O75394 65 aaKnown RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 IL18BPO95998 194 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 CGAP01215 116 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 ACADSP16219 412 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 GRK5P34947 590 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 OR3A2P47893 321 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 SMSP52788 366 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 RAP1BP61224 184 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 RAP1AP62834 184 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 MYBPC1Q00872 1141 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 LGALS3BPQ08380 585 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 CAMK2DQ13557 499 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 KRR1Q13601 381 aaKnown RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 SNCBQ16143 134 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 MESTQ5EB52 335 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 SLC35F1Q5T1Q4 408 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 SLX4IPQ5VYV7 408 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 CARD17Q5XLA6 110 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 FAM205BPQ63HN1 556 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 NIPAL3Q6P499 406 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 CASP12Q6UXS9 341 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 OR6K3Q8NGY3 331 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 HDAC2Q92769 488 aaKnown RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 SLC25A44Q96H78 314 aaPredicted RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 CCDC120Q96HB5 630 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 ADAD1Q96M93 576 aaKnown RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 SFXN3Q9BWM7 321 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 MRPL13Q9BYD1 178 aaKnown RBP10.55□□□□□ -0.72
COMMD9-208ENST00000533643 RASSF4Q9H2L5 321 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 VCXQ9H320 206 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 C12orf49Q9H741 205 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 PLSCR4Q9NRQ2 329 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 FAM118AQ9NWS6 357 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 MED12LQ86YW9 2145 aa10.55□□□□□ -0.72
COMMD9-208ENST00000533643 ESPL1Q14674 2120 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 H0YJX3 145 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 ARHGEF9O43307 516 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 AKAP8O43823 692 aaKnown RBP10.54□□□□□ -0.72
COMMD9-208ENST00000533643 SLC43A1O75387 559 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 TRMUO75648 421 aaKnown RBP10.54□□□□□ -0.72
COMMD9-208ENST00000533643 SLC2A10O95528 541 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 HMGN1P05114 100 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 PGA4P0DJD7 388 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 PGA3P0DJD8 388 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 HIST1H1CP16403 213 aaKnown RBP10.54□□□□□ -0.72
COMMD9-208ENST00000533643 NOS3P29474 1203 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 OPRM1P35372 400 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 VHLP40337 213 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 CDKN2AP42771 156 aaKnown RBP10.54□□□□□ -0.72
COMMD9-208ENST00000533643 ZNF362Q5T0B9 420 aaPredicted RBP10.54□□□□□ -0.72
COMMD9-208ENST00000533643 TSPO2Q5TGU0 170 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 C12orf73Q69YU5 71 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 TFAP2EQ6VUC0 442 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 PTCHD4Q6ZW05 846 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 HDDC2Q7Z4H3 204 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 LIX1LQ8IVB5 337 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 C20orf196Q8IYI0 205 aa10.54□□□□□ -0.72
COMMD9-208ENST00000533643 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms