RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 GTF3C1Q12789 2109 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 CACNA1BQ00975 2339 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 LOC102725191A0A1B0GVB3 256 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 SLC35F4A4IF30 521 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 TRAF3IP2O43734 574 aaPredicted RBP23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 TXNDC12O95881 172 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 TGM6O95932 706 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 IGHMP01871 453 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 SNRPGP62308 76 aaKnown RBP23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 CAMK2DQ13557 499 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 ABLIM2Q6H8Q1 611 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 SYT14Q8NB59 555 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 BPIFB6Q8NFQ5 453 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 RERGLQ9H628 205 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 HINT3Q9NQE9 182 aaKnown RBP23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 KLHL9Q9P2J3 617 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 SPTA1P02549 2419 aa23.59■■□□□ 1.37
NDUFS3-211ENST00000533507 AHRRA9YTQ3 701 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 ENTPD6O75354 484 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 GABRB1P18505 474 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 NUDT6P53370 316 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 SLC16A1P53985 500 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 EFNB1P98172 346 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 RUNX1T1Q06455 604 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 POU4F3Q15319 338 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 KLHL12Q53G59 568 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 ARMC4Q5T2S8 1044 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 CD163Q86VB7 1156 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 OR9Q1Q8NGQ5 310 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 ZNF519Q8TB69 540 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 RNF128Q8TEB7 428 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 Q96MT0 163 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 OR51V1Q9H2C8 321 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 AMBNQ9NP70 447 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 USP24Q9UPU5 2620 aa23.58■■□□□ 1.37
NDUFS3-211ENST00000533507 ZNF716A6NP11 495 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 WBP4O75554 376 aaKnown RBP23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 RENP00797 406 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 C6orf141Q5SZD1 244 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 GTF2IRD2BQ6EKJ0 949 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 GTF2IRD2Q86UP8 949 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 FAM26EQ8N5C1 309 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 NPEPL1Q8NDH3 523 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 RPRD1BQ9NQG5 326 aaKnown RBP23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 OR6C68A6NDL8 312 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 A6NIZ1 184 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 KDM4EB2RXH2 506 aaPredicted RBP23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 GYPBP06028 91 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 RAP1BP61224 184 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 RPS7P62081 194 aaKnown RBP23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 RAP1AP62834 184 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 NIPAL3Q6P499 406 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 BBS1Q8NFJ9 593 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 NR1H4Q96RI1 486 aaPredicted RBP23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 CALHM2Q9HA72 323 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 SRA1Q9HD15 236 aaKnown RBP23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 FLVCR1Q9Y5Y0 555 aa23.57■■□□□ 1.36
NDUFS3-211ENST00000533507 CLUP10909 449 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 CLRN1P58418 232 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 RNPS1Q15287 305 aaKnown RBP23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 RPTNQ6XPR3 784 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 WDFY1Q8IWB7 410 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 TUSC5Q8IXB3 177 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 CPT1CQ8TCG5 803 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 HDAC2Q92769 488 aaKnown RBP23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 WBP1Q96G27 269 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 HCAR1Q9BXC0 346 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 SYT4Q9H2B2 425 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 ZNF175Q9Y473 711 aa23.56■■□□□ 1.36
NDUFS3-211ENST00000533507 NPIPB13A6NJU9 1138 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 NPIPB4C9JG80 1138 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 TRMUO75648 421 aaKnown RBP23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 FCGR2AP12318 317 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 MEDAGQ5VYS4 303 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 UGT2A3Q6UWM9 527 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 NHLRC1Q6VVB1 395 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 HDDC2Q7Z4H3 204 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 ADCK1Q86TW2 530 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 FAM57AQ8TBR7 257 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 FBLIM1Q8WUP2 373 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 PTP4A1Q93096 173 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 ZNF566Q969W8 418 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 ZNF582Q96NG8 517 aaPredicted RBP23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 TSSK2Q96PF2 358 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 PRSS37A4D1T9 235 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 XPNPEP2O43895 674 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 FAM20BO75063 409 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 SF3B4Q15427 424 aaKnown RBP eCLIP23.55■■□□□ 1.369e-8■■□□□ 11.8
NDUFS3-211ENST00000533507 ACSF3Q4G176 576 aaPredicted RBP23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 FAM205BPQ63HN1 556 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 LAIR2Q6ISS4 152 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 C3P1Q6ZMU1 363 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 ZIC4Q8N9L1 334 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 OR51L1Q8NGJ5 315 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 OR6X1Q8NH79 312 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 SLC25A44Q96H78 314 aaPredicted RBP23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 EMC3Q9P0I2 261 aa23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 NOSIPQ9Y314 301 aaKnown RBP23.55■■□□□ 1.36
NDUFS3-211ENST00000533507 FIGNL2A6NMB9 653 aa23.54■■□□□ 1.36
NDUFS3-211ENST00000533507 GPR171O14626 319 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms