RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 HNRNPA0Q13151 305 aaKnown RBP6.91□□□□□ -1.3
CD44-232ENST00000531118 KIAA0040Q15053 153 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 TSTQ16762 297 aaKnown RBP6.91□□□□□ -1.3
CD44-232ENST00000531118 SPDYE7PQ495Y7 208 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 PRAMEF8Q5VWM4 474 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 PRAMEF7Q5VXH5 474 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 BRD3OSQ6XYD6 125 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 R3HCC1LQ7Z5L2 792 aaKnown RBP6.91□□□□□ -1.3
CD44-232ENST00000531118 SLC35F6Q8N357 371 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 GPR137CQ8N3F9 429 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 ARFGAP2Q8N6H7 521 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 OR5AK3PQ8NH89 298 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 PMM1Q92871 262 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 MISP3Q96FF7 219 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 GRPEL1Q9HAV7 217 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 MID1IP1Q9NPA3 183 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 DECR2Q9NUI1 292 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 ADPRHL2Q9NX46 363 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 GPR160Q9UJ42 338 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 PPP2R2CQ9Y2T4 447 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 SLC22A23A1A5C7 686 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 F5H0A9 414 aaPredicted RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 TM9SF1O15321 606 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 ZSCAN12O43309 604 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 GPR137BO60478 399 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 SCN2BO60939 215 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 MELTFP08582 738 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 OR8G3PP0DMU2 310 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 B4GALT1P15291 398 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 TAC1P20366 129 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 PRPH2P23942 346 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 SOAT1P35610 550 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 MAGEA4P43358 317 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 PTDSS1P48651 473 aaKnown RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 CCT3P49368 545 aaKnown RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 CLDN17P56750 224 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 ERVS71-1P61550 626 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 RPL38P63173 70 aaKnown RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 MRPS25P82663 173 aaKnown RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 PAX8Q06710 450 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 SLC3A1Q07837 685 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 DBPQ10586 325 aaPredicted RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 TMEM225Q6GV28 225 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 Q6YL49 198 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 HMGN2P46Q86SG4 172 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 SPICQ8N5J4 248 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 OR10S1Q8NGN2 331 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 PSMA8Q8TAA3 256 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 OIT3Q8WWZ8 545 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 CCL17Q92583 94 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 MTERF3Q96E29 417 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 SLC47A1Q96FL8 570 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 TAPBPLQ9BX59 468 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 GSTO2Q9H4Y5 243 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 PATZ1Q9HBE1 687 aaKnown RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 NOX4Q9NPH5 578 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 RRAGDQ9NQL2 400 aaPredicted RBP6.9□□□□□ -1.3
CD44-232ENST00000531118 DCAF16Q9NXF7 216 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 SLCO1C1Q9NYB5 712 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 ZNF224Q9NZL3 707 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 RASD1Q9Y272 281 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 CCL27Q9Y4X3 112 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 POMT1Q9Y6A1 747 aa6.9□□□□□ -1.3
CD44-232ENST00000531118 STAB2Q8WWQ8 2551 aa6.9□□□□□ -1.31
CD44-232ENST00000531118 TENM2Q9NT68 2774 aa6.9□□□□□ -1.31
CD44-232ENST00000531118 CLDN24A6NM45 220 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 RGS13O14921 159 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 SEC22BO75396 215 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 UBOX5O94941 541 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 TGDSO95455 350 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 C6orf47O95873 294 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 IGHV1-46P01743 117 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 ZNF250P15622 560 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 CD80P33681 288 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 HPCAL1P37235 193 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 GIPRP48546 466 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 MAP2K6P52564 334 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 SELENOVP59797 346 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 PIGFQ07326 219 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 FUT5Q11128 374 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 RAB39AQ14964 217 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 ARHGAP11BQ3KRB8 267 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 FAM209AQ5JX71 171 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 TEX35Q5T0J7 233 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 LIPMQ5VYY2 423 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 TYW3Q6IPR3 259 aaKnown RBP6.89□□□□□ -1.31
CD44-232ENST00000531118 ZNF813Q6ZN06 617 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 FRRS1Q6ZNA5 592 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 ZNF620Q6ZNG0 422 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 C16orf62Q7Z3J2 963 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 ZNF584Q8IVC4 421 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 TMEM123Q8N131 208 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 SYNPRQ8TBG9 265 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 CNOT9Q92600 299 aaKnown RBP6.89□□□□□ -1.31
CD44-232ENST00000531118 SGCDQ92629 289 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 DYRK2Q92630 601 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 PHF21AQ96BD5 680 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 MOAP1Q96BY2 351 aa6.89□□□□□ -1.31
CD44-232ENST00000531118 L3HYPDHQ96EM0 354 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms