RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TRBV2A0A0J9YWF9 115 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TEX13CA0A0J9YWL9 993 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 A0A1W2PQ09 198 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ANKUB1A6NFN9 424 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 CD8B2A6NJW9 211 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 VSTM2BA6NLU5 285 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 IDSB3KWA1 339 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 J3QLW9 94 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 XKRYO14609 159 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 FLRT2O43155 660 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 NPIPB7O75200 414 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ALOX12BO75342 701 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ITGA10O75578 1167 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SCRG1O75711 98 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 HEXBP07686 556 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 PRKAR1AP10644 381 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SLC2A2P11168 524 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 FGF5P12034 268 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TDGF1P13385 188 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZNF19P17023 458 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 RAB3BP20337 219 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 NPR2P20594 1047 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 GTF2E2P29084 291 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 EVI2BP34910 448 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 CD79BP40259 229 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 DHPSP49366 369 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 RGS19P49795 217 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 OR12D2P58182 307 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 CTXN1P60606 82 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 RNF4P78317 190 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 MRPS10P82664 201 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 PITPNAQ00169 270 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 EGR4Q05215 589 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 RPL18Q07020 188 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 RASGEF1BQ0VAM2 473 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZP4Q12836 540 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SNTA1Q13424 505 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SF3A2Q15428 464 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 ACSM3Q53FZ2 586 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 HSD17B12Q53GQ0 312 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 PYDC2Q56P42 97 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 VWA2Q5GFL6 755 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SLC25A53Q5H9E4 307 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZMAT1Q5H9K5 638 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZNF684Q5T5D7 378 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 LINC01590Q5TEZ4 76 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 EEF1A1P5Q5VTE0 462 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 AGAP6Q5VW22 663 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 PYHIN1Q6K0P9 492 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SFXN4Q6P4A7 337 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 LEG1Q6P5S2 330 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TMEM81Q6P7N7 255 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 CNIH2Q6PI25 160 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 DNM1P34Q6PK57 102 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ARL9Q6T311 187 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TMEM205Q6UW68 189 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 LRRN1Q6UXK5 716 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 UNQ9370/PRO34162Q6UXP9 181 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 APOOLQ6UXV4 268 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 COX15Q7KZN9 410 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 GDPD3Q7L5L3 318 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 CEACAM19Q7Z692 300 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ANKRD37Q7Z713 158 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 PPP1R3BQ86XI6 285 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 Q8N402 240 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 EID2Q8N6I1 236 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 C10orf53Q8N6V4 93 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZFP41Q8N8Y5 198 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 Q8N9G6 341 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 EXD3Q8N9H8 876 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 DTWD2Q8NBA8 298 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 CYB561A3Q8NBI2 242 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 LSM14AQ8ND56 463 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZNF248Q8NDW4 579 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ADPRHL1Q8NDY3 354 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 C19orf18Q8NEA5 215 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 FAM83FQ8NEG4 500 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 NFAM1Q8NET5 270 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 SDR9C7Q8NEX9 313 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 OR5J2Q8NH18 312 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SLC22A8Q8TCC7 542 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 GPR119Q8TDV5 335 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ADAMTS14Q8WXS8 1223 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 GHSRQ92847 366 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZMYND19Q96E35 227 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 PELI1Q96FA3 418 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ZC3H10Q96K80 434 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 AGAP4Q96P64 663 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 KCNJ15Q99712 375 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 C7orf50Q9BRJ6 194 aaKnown RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 NUDT22Q9BRQ3 303 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TRAF4Q9BUZ4 470 aaPredicted RBP5.03□□□□□ -1.6
PCF11-205ENST00000530906 POTEKPQ9BYX7 375 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 SLITRK2Q9H156 845 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 TXNIPQ9H3M7 391 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 LRRN3Q9H3W5 708 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 WDR76Q9H967 626 aa5.03□□□□□ -1.6
PCF11-205ENST00000530906 ISG20L2Q9H9L3 353 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms