RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 CACNG6Q9BXT2 260 aa16.39■□□□□ 0.21
PCNX3-203ENST00000530174 FAM107BQ9H098 131 aa16.39■□□□□ 0.21
PCNX3-203ENST00000530174 B3GAT2Q9NPZ5 323 aa16.39■□□□□ 0.21
PCNX3-203ENST00000530174 RIMS3Q9UJD0 308 aa16.39■□□□□ 0.21
PCNX3-203ENST00000530174 CSPG4Q6UVK1 2322 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 ZNF503-AS2A6NEH8 195 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 FAM171A2A8MVW0 826 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 NME4O00746 187 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 RNF13O43567 381 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 LY6G6DO95868 133 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 IGKV3-15P01624 115 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 IGLV1-44P01699 117 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 MT-ND1P03886 318 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 HIST1H2ABP04908 130 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 NUDT2P50583 147 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 SELENOWP63302 87 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 NAAAQ02083 359 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 C3orf36Q3SXR2 165 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 SLC35D2Q76EJ3 337 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 HIST3H2AQ7L7L0 130 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 NANOGNBQ7Z5D8 188 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 FAM169BQ8N8A8 192 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 HIST1H2ACQ93077 130 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 HOPXQ9BPY8 73 aaPredicted RBP16.38■□□□□ 0.21
PCNX3-203ENST00000530174 ULBP2Q9BZM5 246 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 MYLK2Q9H1R3 596 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 SEC61A2Q9H9S3 476 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 EFCAB1Q9HAE3 211 aa16.38■□□□□ 0.21
PCNX3-203ENST00000530174 MOV10Q9HCE1 1003 aaKnown RBP16.38■□□□□ 0.21
PCNX3-203ENST00000530174 NSD1Q96L73 2696 aaPredicted RBP16.38■□□□□ 0.21
PCNX3-203ENST00000530174 NIPBLQ6KC79 2804 aaeCLIP16.37■□□□□ 0.21
PCNX3-203ENST00000530174 CRYAAP02489 173 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 HEXAP06865 529 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 CELA3BP08861 270 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 THRBP10828 461 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 CBR1P16152 277 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 APOBEC3AP31941 199 aaPredicted RBP16.37■□□□□ 0.21
PCNX3-203ENST00000530174 CAPZA2P47755 286 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 CSNK1A1P48729 337 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 MELKQ14680 651 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 HACD2Q6Y1H2 254 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 MYPOPQ86VE0 399 aaPredicted RBP16.37■□□□□ 0.21
PCNX3-203ENST00000530174 OR6X1Q8NH79 312 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 TMEM239Q8WW34 195 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 LZICQ8WZA0 190 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 ADAD1Q96M93 576 aaKnown RBP16.37■□□□□ 0.21
PCNX3-203ENST00000530174 BARX1Q9HBU1 254 aaPredicted RBP16.37■□□□□ 0.21
PCNX3-203ENST00000530174 C20orf141Q9NUB4 165 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 POFUT2Q9Y2G5 429 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 ZANQ9Y493 2812 aa16.37■□□□□ 0.21
PCNX3-203ENST00000530174 BLOC1S5-TXNDC5H3BN57 136 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 CXCR6O00574 342 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 OR7A10O76100 309 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 FUT1P19526 365 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 DRD4P21917 467 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 CALCRP30988 508 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 GSK3BP49841 420 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 IDH3GP51553 393 aaPredicted RBP16.36■□□□□ 0.21
PCNX3-203ENST00000530174 ZNF813Q6ZN06 617 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 ZNF627Q7L945 461 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 MDP1Q86V88 176 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 CCDC36Q8IYA8 594 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 TMEM54Q969K7 222 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 SGTBQ96EQ0 304 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 POM121Q96HA1 1249 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 PRRC1Q96M27 445 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 NSRP1Q9H0G5 558 aaKnown RBP16.36■□□□□ 0.21
PCNX3-203ENST00000530174 A4GNTQ9UNA3 340 aa16.36■□□□□ 0.21
PCNX3-203ENST00000530174 NAV3Q8IVL0 2385 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 GSTA4O15217 222 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 SNX3O60493 162 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 ZNF682O95780 498 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 IGF2P01344 180 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 HLA-HP01893 362 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 B4GALT1P15291 398 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 HOXB4P17483 251 aaPredicted RBP16.35■□□□□ 0.21
PCNX3-203ENST00000530174 LSP1P33241 339 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 ARR3P36575 388 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 RPL18Q07020 188 aaKnown RBP16.35■□□□□ 0.21
PCNX3-203ENST00000530174 NPRL3Q12980 569 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 DNM1P46Q6ZS02 220 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 HTRA1Q92743 480 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 ZNF566Q969W8 418 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 CMTM5Q96DZ9 223 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 SLC25A44Q96H78 314 aaPredicted RBP16.35■□□□□ 0.21
PCNX3-203ENST00000530174 FOXB1Q99853 325 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 CA10Q9NS85 328 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 GLTPQ9NZD2 209 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 MED31Q9Y3C7 131 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 SNX13Q9Y5W8 968 aa16.35■□□□□ 0.21
PCNX3-203ENST00000530174 RNF223E7ERA6 249 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 H7C417 338 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 SSX4O60224 188 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 PIP5K1CO60331 668 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 IFNW1P05000 195 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 YAP1P46937 504 aaKnown RBP16.34■□□□□ 0.21
PCNX3-203ENST00000530174 GYS2P54840 703 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 CHRNB3Q05901 458 aa16.34■□□□□ 0.21
PCNX3-203ENST00000530174 ST3GAL3Q11203 375 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms