RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 A0A1W2PRG6 482 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ZNF726A6NNF4 738 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 AKAP8O43823 692 aaKnown RBP12.37□□□□□ -0.43
USF1-209ENST00000529476 NDUFB2O95178 105 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 BCL10O95999 233 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ADAP00813 363 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ZNF23P17027 643 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ERVK-25P63136 954 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 FAM27E3Q08E93 113 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 TOP3AQ13472 1001 aaPredicted RBP12.37□□□□□ -0.43
USF1-209ENST00000529476 CAMK2DQ13557 499 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 SMARCD3Q6STE5 483 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ZNF620Q6ZNG0 422 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 BEND4Q6ZU67 534 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ZNF771Q7L3S4 317 aaPredicted RBP12.37□□□□□ -0.43
USF1-209ENST00000529476 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 TMEM123Q8N131 208 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ASB10Q8WXI3 467 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 STMN2Q93045 179 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 RNASE6Q93091 150 aaKnown RBP12.37□□□□□ -0.43
USF1-209ENST00000529476 NRBF2Q96F24 287 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 KATNB1Q9BVA0 655 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ZNF346Q9UL40 294 aaKnown RBP12.37□□□□□ -0.43
USF1-209ENST00000529476 SAC3D1A6NKF1 404 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 PRSS44E7EML9 344 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 G3V2T6 193 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 SLC43A1O75387 559 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 UPK3AO75631 287 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 IGHMP01871 453 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 CD14P08571 375 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 IGFBP1P08833 259 aaPredicted RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 PRF1P14222 555 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 GSTM3P21266 225 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 CD79BP40259 229 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 RUNX1T1Q06455 604 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 FAPQ12884 760 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 SNTB1Q13884 538 aaKnown RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 RFX4Q33E94 735 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 ARMC4Q5T2S8 1044 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 Q6ZT83 130 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 HIPK1Q86Z02 1210 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 ATG16L2Q8NAA4 619 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 ICA1LQ8NDH6 482 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 OR6X1Q8NH79 312 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 SAMD8Q96LT4 415 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 ADAD1Q96M93 576 aaKnown RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 POLDIP3Q9BY77 421 aaKnown RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 NDEL1Q9GZM8 345 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 TXNIPQ9H3M7 391 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 EGLN3Q9H6Z9 239 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 ELOVL5Q9NYP7 299 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 UPB1Q9UBR1 384 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 MALT1Q9UDY8 824 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 ADAM18Q9Y3Q7 739 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 KLF2Q9Y5W3 355 aaPredicted RBP12.36□□□□□ -0.43
USF1-209ENST00000529476 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
USF1-209ENST00000529476 NPIPB13A6NJU9 1138 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 NPIPB4C9JG80 1138 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 KRT33AO76009 404 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 SOX14O95416 240 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 PPP1R3DO95685 299 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 TP53P04637 393 aaPredicted RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 ANXA8P13928 327 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 IGHV1-2P23083 117 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 RPL27P61353 136 aaKnown RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 ELF3P78545 371 aaPredicted RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 TAF11Q15544 211 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 KLHL17Q6TDP4 642 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 CD300LDQ6UXZ3 194 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 LINGO2Q7L985 606 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 ZDHHC13Q8IUH4 622 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 SVOPLQ8N434 492 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 POMGNT2Q8NAT1 580 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 OR8D4Q8NGM9 314 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 LRRC46Q96FV0 321 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 SLC25A44Q96H78 314 aaPredicted RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 ALKBH3Q96Q83 286 aaPredicted RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 GPX7Q96SL4 187 aaPredicted RBP12.35□□□□□ -0.43
USF1-209ENST00000529476 PLA2G12AQ9BZM1 189 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 LINC00470Q9BZP3 86 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 ZNF556Q9HAH1 456 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 NRIP3Q9NQ35 241 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 ASB6Q9NWX5 421 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 KIF17Q9P2E2 1029 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 REV1Q9UBZ9 1251 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms