RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 EFCAB1Q9HAE3 211 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF229Q9UJW7 825 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 ZANQ9Y493 2812 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 ARPC4-TTLL3A0A0A6YYG9 625 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 FAM171A2A8MVW0 826 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 SSX4O60224 188 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 OR5F1O95221 314 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 LY6G6DO95868 133 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 CELA3BP08861 270 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 CECR9P0C854 216 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 YAP1P46937 504 aaKnown RBP13.53□□□□□ -0.24
CAPN1-213ENST00000527897 NUDT6P53370 316 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 UGT2B15P54855 530 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 C1QTNF12Q5T7M4 302 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF813Q6ZN06 617 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 VTCN1Q7Z7D3 282 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 CPLX4Q7Z7G2 160 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 TMEM239Q8WW34 195 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 FBXO17Q96EF6 278 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 BOD1Q96IK1 185 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 NSRP1Q9H0G5 558 aaKnown RBP13.53□□□□□ -0.24
CAPN1-213ENST00000527897 MEPEQ9NQ76 525 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-213ENST00000527897 TAS2R5Q9NYW4 299 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
CAPN1-213ENST00000527897 RNF223E7ERA6 249 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 CXCR6O00574 342 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 NME4O00746 187 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 HLA-HP01893 362 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 MT-ND1P03886 318 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-213ENST00000527897 B4GALT1P15291 398 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-213ENST00000527897 GYS2P54840 703 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 SELENOWP63302 87 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 NAAAQ02083 359 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 CHRNB3Q05901 458 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 PIGFQ07326 219 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 RAB35Q15286 201 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 ETFDHQ16134 617 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 C11orf71Q6IPW1 123 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 SLC46A3Q7Z3Q1 461 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 MDP1Q86V88 176 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 SGTBQ96EQ0 304 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 LRR1Q96L50 414 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 HOPXQ9BPY8 73 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF426Q9BUY5 554 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 KATNB1Q9BVA0 655 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 BARX1Q9HBU1 254 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-213ENST00000527897 C20orf141Q9NUB4 165 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 RHCGQ9UBD6 479 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 MED31Q9Y3C7 131 aa13.52□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 MCIDASD6RGH6 385 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 PIP5K1CO60331 668 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 OR7A10O76100 309 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 F13BP05160 661 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 HEXAP06865 529 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 ASAH2BP0C7U1 165 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 BMP4P12644 408 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 CBR1P16152 277 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 FUT1P19526 365 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 PAX7P23759 505 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 CALCRP30988 508 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 IFNA8P32881 189 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 LSP1P33241 339 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 RBM34P42696 430 aaKnown RBP13.51□□□□□ -0.25
CAPN1-213ENST00000527897 GSK3BP49841 420 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 ZP4Q12836 540 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 NHLRC1Q6VVB1 395 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 FKBP9P1Q75LS8 142 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 MYPOPQ86VE0 399 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-213ENST00000527897 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF566Q969W8 418 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 FAM162AQ96A26 154 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 CMTM5Q96DZ9 223 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 FOXB1Q99853 325 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 KCTD14Q9BQ13 255 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-213ENST00000527897 GRIP2Q9C0E4 1043 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 POLR2J2Q9GZM3 115 aaKnown RBP13.51□□□□□ -0.25
CAPN1-213ENST00000527897 POLR2J3Q9H1A7 115 aaKnown RBP13.51□□□□□ -0.25
CAPN1-213ENST00000527897 MOV10Q9HCE1 1003 aaKnown RBP13.51□□□□□ -0.25
CAPN1-213ENST00000527897 GLTPQ9NZD2 209 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 PMF1-BGLAPU3KQ54 211 aa13.51□□□□□ -0.25
CAPN1-213ENST00000527897 A0A1W2PRG6 482 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 J3KTA2 159 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 BCL10O95999 233 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 SERPINA1P01009 418 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 IGLV1-44P01699 117 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 IFNW1P05000 195 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 NCK1P16333 377 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 DRD4P21917 467 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 ARR3P36575 388 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 AQP2P41181 271 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 CLRN1P58418 232 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 PSME3P61289 254 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 GNGT1P63211 74 aa13.5□□□□□ -0.25
CAPN1-213ENST00000527897 RPL18Q07020 188 aaKnown RBP13.5□□□□□ -0.25
CAPN1-213ENST00000527897 ST3GAL3Q11203 375 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms