RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ASF1AQ9Y294 204 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 PRG3Q9Y2Y8 225 aaPredicted RBP5.33□□□□□ -1.56
CD44-225ENST00000527326 A0A0G2JMZ2 1700 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 LRRC37A2A6NM11 1700 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 LRRC37AA6NMS7 1700 aa5.33□□□□□ -1.56
CD44-225ENST00000527326 COL5A3P25940 1745 aaPredicted RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 A0A087WZY1 265 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KIR2DL5BA0A0G2JN68 375 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KIR2DL5BA0A0G2JPC4 375 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TEX13DA0A0J9YY54 714 aaPredicted RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 SHISA3A0PJX4 238 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CBY3A6NI87 242 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SLC22A31A6NKX4 558 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 FAM157AC9JC47 383 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 M0R036 132 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 DDX39AO00148 427 aaKnown RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 GABRDO14764 452 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 NPC1O15118 1278 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KCNAB3O43448 404 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PLRG1O43660 514 aaKnown RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 FMO6PO60774 539 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CA11O75493 328 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GOSR1O95249 250 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KCNK5O95279 499 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 OR2C1O95371 312 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PAPLNO95428 1278 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CSTAP01040 98 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ASGR2P07307 311 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CHRM4P08173 479 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SOD3P08294 240 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 IL3P08700 152 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CTXN2P0C2S0 81 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GZMBP10144 247 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TXNP10599 105 aaKnown RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 CD8BP10966 210 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 FOSL2P15408 326 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 EPCAMP16422 314 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 MAOAP21397 527 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SLC2A5P22732 501 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CASRP41180 1078 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 NDUFV1P49821 464 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 MVDP53602 400 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TAS2R19P59542 299 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ACTBP60709 375 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ACTA2P62736 377 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 RPL38P63173 70 aaKnown RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 ACTG1P63261 375 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ACTG2P63267 376 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SELENOWP63302 87 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ACTC1P68032 377 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ACTA1P68133 377 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 OLIG2Q13516 323 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ZNF234Q14588 700 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 OR4D1Q15615 310 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 UBE2V2Q15819 145 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GUK1Q16774 197 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 IQCJQ1A5X6 159 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TMEM241Q24JQ0 296 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ZNF674Q2M3X9 581 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 MST1LQ2TV78 715 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 RAB41Q5JT25 222 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 UBE2NLQ5JXB2 153 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 C1orf194Q5T5A4 169 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 FBXO42Q6P3S6 717 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PSRC1Q6PGN9 363 aaPredicted RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 ENPP7Q6UWV6 458 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TMEM207Q6UWW9 146 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SERPINA13PQ6UXR4 307 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 APOOLQ6UXV4 268 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CEACAM20Q6UY09 585 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GDPD4Q6W3E5 623 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 WDR88Q6ZMY6 472 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ZNF620Q6ZNG0 422 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ADIPOR2Q86V24 386 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 MYPOPQ86VE0 399 aaPredicted RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 WFDC3Q8IUB2 231 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TRAPPC5Q8IUR0 188 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KIR2DL5AQ8N109 375 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 BEST3Q8N1M1 668 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 LRRC52Q8N7C0 313 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 INO80EQ8NBZ0 244 aaPredicted RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 OR1J2Q8NGS2 313 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GPR150Q8NGU9 434 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SPPL2AQ8TCT8 520 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 KCNE4Q8WWG9 221 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GEMIN6Q8WXD5 167 aaKnown RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 ARSGQ96EG1 525 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PIK3IP1Q96FE7 263 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 DTD2Q96FN9 168 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TMEM176AQ96HP8 235 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 WDR92Q96MX6 357 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SLC6A18Q96N87 628 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ZFP3Q96NJ6 502 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CDC6Q99741 560 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TXN2Q99757 166 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 DUSP23Q9BVJ7 150 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 FSD1LQ9BXM9 530 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms