RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SAGP10523 405 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-206ENST00000526966 KITP10721 976 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 CBLP22681 906 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 COL8A2P25067 703 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 TRMT5Q32P41 509 aaKnown RBP16.09■□□□□ 0.17
CAPN1-206ENST00000526966 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 REP15Q6BDI9 236 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 ULK3Q6PHR2 472 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 DHRS4L2Q6PKH6 230 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 SYT3Q9BQG1 590 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 PLA2G12AQ9BZM1 189 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 OCEL1Q9H607 264 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 B3GAT2Q9NPZ5 323 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 HIF1ANQ9NWT6 349 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 MED29Q9NX70 200 aa16.09■□□□□ 0.17
CAPN1-206ENST00000526966 MYEF2Q9P2K5 600 aaKnown RBP16.09■□□□□ 0.17
CAPN1-206ENST00000526966 TESQ9UGI8 421 aaKnown RBP16.09■□□□□ 0.17
CAPN1-206ENST00000526966 WNT9BO14905 357 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 MSMBP08118 114 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 B4GALT1P15291 398 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 NQO1P15559 274 aaKnown RBP16.08■□□□□ 0.16
CAPN1-206ENST00000526966 ALDH3B1P43353 468 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 SEC24CP53992 1094 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 RPS23P62266 143 aaKnown RBP16.08■□□□□ 0.16
CAPN1-206ENST00000526966 MRPS11P82912 194 aaKnown RBP16.08■□□□□ 0.16
CAPN1-206ENST00000526966 PIGFQ07326 219 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 LRP11Q86VZ4 500 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 ANKRD42Q8N9B4 389 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 YIPF5Q969M3 257 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 SLC47A1Q96FL8 570 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 TXNDC15Q96J42 360 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 OR52B2Q96RD2 323 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 EPYCQ99645 322 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 FOXB1Q99853 325 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 ULBP2Q9BZM5 246 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 CENPHQ9H3R5 247 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF275Q9NSD4 429 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-206ENST00000526966 MRPL39Q9NYK5 338 aaKnown RBP16.08■□□□□ 0.16
CAPN1-206ENST00000526966 POFUT2Q9Y2G5 429 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 NOX1Q9Y5S8 564 aa16.08■□□□□ 0.16
CAPN1-206ENST00000526966 A0A0B4J2E0 115 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 A0A1B0GX12 115 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 C5orf58C9J3I9 102 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 UBDO15205 165 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 TPST1O60507 370 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 RP2O75695 350 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 NCR1O76036 304 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 GAAP10253 952 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 ARAFP10398 606 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 TCN1P20061 433 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-206ENST00000526966 GIPRP48546 466 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 PTDSS1P48651 473 aaKnown RBP16.07■□□□□ 0.16
CAPN1-206ENST00000526966 COMPP49747 757 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-206ENST00000526966 AQP5P55064 265 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM33P57088 247 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 RAB1AP62820 205 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 PUDPQ08623 228 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 MAD2L1BPQ15013 274 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-206ENST00000526966 SLC2A7Q6PXP3 512 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 SNX32Q86XE0 403 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 MIER2Q8N344 545 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 MOGAT1Q96PD6 335 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 ASPNQ9BXN1 380 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF385DQ9H6B1 395 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 NARFLQ9H6Q4 476 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 TMBIM4Q9HC24 238 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF446Q9NWS9 450 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 SLC25A37Q9NYZ2 338 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 FBXL3Q9UKT7 428 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 GRIP1Q9Y3R0 1128 aa16.07■□□□□ 0.16
CAPN1-206ENST00000526966 SASH3O75995 380 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 UBL3O95164 117 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 RAB36O95755 333 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 LMO4P61968 165 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 GALK2Q01415 458 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 SCGB2A2Q13296 93 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 CAMK2DQ13557 499 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 LRIF1Q5T3J3 769 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 GKAP1Q5VSY0 366 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-206ENST00000526966 PXKQ7Z7A4 578 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 ZNF584Q8IVC4 421 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 MSRB3Q8IXL7 192 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 C10orf111Q8N326 155 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 OR6N1Q8NGY5 312 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 OR51F2Q8NH61 342 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 NFKBIDQ8NI38 313 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 LRRC37BQ96QE4 947 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 LPAR2Q9HBW0 351 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM120BA0PK00 339 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 MRPL19P49406 292 aaKnown RBP16.05■□□□□ 0.16
CAPN1-206ENST00000526966 NCALDP61601 193 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 PMS2P3Q13401 168 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 RAB39AQ14964 217 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 OR1Q1Q15612 314 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 GCNT6Q5T4J0 391 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 REEP3Q6NUK4 255 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 MGARPQ8TDB4 240 aa16.05■□□□□ 0.16
CAPN1-206ENST00000526966 TMEM43Q9BTV4 400 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms