RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 NPIPA1Q9UND3 350 aa18.38■□□□□ 0.53
SMCO4-203ENST00000526869 RASD1Q9Y272 281 aa18.38■□□□□ 0.53
SMCO4-203ENST00000526869 FKBP7Q9Y680 259 aa18.38■□□□□ 0.53
SMCO4-203ENST00000526869 C12orf71A8MTZ7 269 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 ARHGEF9O43307 516 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 TRAPPC6AO75865 159 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 BCL10O95999 233 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 PLGP00747 810 aaPredicted RBP18.37■□□□□ 0.53
SMCO4-203ENST00000526869 SCG5P05408 212 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 CAPZA2P47755 286 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 TNFSF10P50591 281 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 BLVRAP53004 296 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 GFRA1P56159 465 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 SLC16A12Q6ZSM3 486 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 ESPNLQ6ZVH7 1005 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 SLC35D2Q76EJ3 337 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 GALNTL5Q7Z4T8 443 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 ZBTB46Q86UZ6 589 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 ZNF485Q8NCK3 441 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 FDCSPQ8NFU4 85 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 OXGR1Q96P68 337 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 ALG12Q9BV10 488 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 SCNM1Q9BWG6 230 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■■■□ 20.7
SMCO4-203ENST00000526869 PTTG2Q9NZH5 202 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 SSUH2Q9Y2M2 353 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 CAB39Q9Y376 341 aaPredicted RBP18.37■□□□□ 0.53
SMCO4-203ENST00000526869 MSRB2Q9Y3D2 182 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 KCNMB2Q9Y691 235 aa18.37■□□□□ 0.53
SMCO4-203ENST00000526869 H3BMQ9 156 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 KLK10O43240 276 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 EFSO43281 561 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 VAMP5O95183 116 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 OPN1LWP04000 364 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 HLA-DOBP13765 273 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 CD36P16671 472 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 LIPAP38571 399 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 MEOX1P50221 254 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 AGFG1P52594 562 aaKnown RBP18.36■□□□□ 0.53
SMCO4-203ENST00000526869 POU3F1Q03052 451 aaPredicted RBP18.36■□□□□ 0.53
SMCO4-203ENST00000526869 ACSM1Q08AH1 577 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 GALEQ14376 348 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 POU4F3Q15319 338 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 ZNF766Q5HY98 468 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 WIPI1Q5MNZ9 446 aaPredicted RBP18.36■□□□□ 0.53
SMCO4-203ENST00000526869 C19orf48Q6RUI8 117 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 B3GLCTQ6Y288 498 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 TMPRSS11AQ6ZMR5 421 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 UEVLDQ8IX04 471 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 SMPDL3BQ92485 455 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 RELTQ969Z4 430 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 ZMYND19Q96E35 227 aaPredicted RBP18.36■□□□□ 0.53
SMCO4-203ENST00000526869 ZHX1-C8orf76Q96EF9 292 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 OPALINQ96PE5 141 aa18.36■□□□□ 0.53
SMCO4-203ENST00000526869 MYCBPQ99417 103 aaPredicted RBP18.36■□□□□ 0.53
SMCO4-203ENST00000526869 NAA50Q9GZZ1 169 aaKnown RBP18.36■□□□□ 0.53
SMCO4-203ENST00000526869 A0A0J9YW62 118 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 SLC22A23A1A5C7 686 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 CCRL2O00421 344 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 TLX3O43711 291 aaPredicted RBP18.35■□□□□ 0.53
SMCO4-203ENST00000526869 OR2T7P0C7T2 308 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 IFNGR1P15260 489 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 RGS6P49758 472 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 PLGLB1Q02325 96 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 HSF2Q03933 536 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 GGNQ86UU5 652 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 SLC22A16Q86VW1 577 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 TMEM251Q8N6I4 163 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 OR2T27Q8NH04 317 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 NMD3Q96D46 503 aaKnown RBP18.35■□□□□ 0.53
SMCO4-203ENST00000526869 TSPAN10Q9H1Z9 355 aaPredicted RBP18.35■□□□□ 0.53
SMCO4-203ENST00000526869 SYT4Q9H2B2 425 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 MARCH7Q9H992 704 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 KLHL13Q9P2N7 655 aa18.35■□□□□ 0.53
SMCO4-203ENST00000526869 NCKAP5O14513 1909 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 DAPL1A0PJW8 107 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 H7C1C5 153 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 TRAF3IP2O43734 574 aaPredicted RBP18.34■□□□□ 0.53
SMCO4-203ENST00000526869 POU3F2P20265 443 aaPredicted RBP18.34■□□□□ 0.53
SMCO4-203ENST00000526869 CRABP1P29762 137 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 PYCR1P32322 319 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 RAC3P60763 192 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 LCN6P62502 163 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 BDH1Q02338 343 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 MELKQ14680 651 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 CTF1Q16619 201 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 TMEM225Q6GV28 225 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 DNM1P34Q6PK57 102 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 LHFPL3Q86UP9 236 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 EGFL6Q8IUX8 553 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 PM20D2Q8IYS1 436 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 OR6V1Q8N148 313 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 GHDCQ8N2G8 530 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 KDM8Q8N371 416 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 OR10H4Q8NGA5 316 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 OR6K6Q8NGW6 343 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 OR2V1Q8NHB1 315 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 ZNRF4Q8WWF5 429 aa18.34■□□□□ 0.53
SMCO4-203ENST00000526869 MRPL48Q96GC5 212 aaKnown RBP18.34■□□□□ 0.53
SMCO4-203ENST00000526869 ADGRG7Q96K78 797 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms