RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 SLC43A1O75387 559 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 CLPTM1O96005 669 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 AVPP01185 164 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 IGLV1-44P01699 117 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 BCHEP06276 602 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 NUDT7P0C024 238 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 TFPTP0C1Z6 253 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 CCL2P13500 99 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 HLA-DOBP13765 273 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 UQCRBP14927 111 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 ADRA2CP18825 462 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 CALB2P22676 271 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 GTF2E2P29084 291 aaKnown RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 RBMXP38159 391 aaKnown RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 PTDSS1P48651 473 aaKnown RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 RASSF2P50749 326 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 DVL1P1P54792 670 aaPredicted RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 HNRNPA0Q13151 305 aaKnown RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 MAPK11Q15759 364 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 SPATS1Q496A3 300 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 C6orf10Q5SRN2 563 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 AP1ARQ63HQ0 302 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 C1orf229Q6ZS94 237 aaPredicted RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 DHDDSQ86SQ9 333 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 SERPINA11Q86U17 422 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 SNX32Q86XE0 403 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 WDFY1Q8IWB7 410 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 SLC30A8Q8IWU4 369 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 CMIPQ8IY22 773 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 ARHGAP24Q8N264 748 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 NUP37Q8NFH4 326 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 OR8J3Q8NGG0 315 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 TAF15Q92804 592 aaKnown RBP eCLIP5.66□□□□□ -1.5
CD44-221ENST00000526000 HPS1Q92902 700 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 TAAR8Q969N4 342 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 VPS33AQ96AX1 596 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 TMEM186Q96B77 213 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 OXGR1Q96P68 337 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 SLC6A13Q9NSD5 602 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 CRNNQ9UBG3 495 aaPredicted RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 RPS6KB2Q9UBS0 482 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 TAGLN3Q9UI15 199 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 PRDM4Q9UKN5 801 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 PCDHB10Q9UN67 800 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 ZNF232Q9UNY5 417 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 RASD1Q9Y272 281 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 ZNF443Q9Y2A4 671 aaPredicted RBP5.66□□□□□ -1.5
CD44-221ENST00000526000 POFUT2Q9Y2G5 429 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 CHST2Q9Y4C5 530 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 PCDHB14Q9Y5E9 798 aa5.66□□□□□ -1.5
CD44-221ENST00000526000 DYSFO75923 2080 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 TRBV5-3A0A0A0MS03 114 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 CDHR4A6H8M9 788 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 LRRN3E7EW58 273 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 M0R082 166 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 M0R233 179 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 MRASO14807 208 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 SYNGR3O43761 229 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 NCR1O76036 304 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 PDE5AO76074 875 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 VAMP5O95183 116 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 HPRP00739 348 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 IGKV3-15P01624 115 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 FAM157BP0CG42 384 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 GAAP10253 952 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 SAGP10523 405 aaPredicted RBP5.65□□□□□ -1.5
CD44-221ENST00000526000 BMP2P12643 396 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 HOXB9P17482 250 aaPredicted RBP5.65□□□□□ -1.5
CD44-221ENST00000526000 RPS4Y1P22090 263 aaKnown RBP5.65□□□□□ -1.5
CD44-221ENST00000526000 NR4A1P22736 598 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 GRPRP30550 384 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 ARR3P36575 388 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 MAGEB1P43366 347 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 GIPRP48546 466 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 LMO4P61968 165 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 EGR4Q05215 589 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 GABPB1Q06547 395 aaPredicted RBP5.65□□□□□ -1.5
CD44-221ENST00000526000 RBBP4Q09028 425 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 CAMK2DQ13557 499 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 NFYCQ13952 458 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 RAB39AQ14964 217 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 GLIPR1L2Q4G1C9 344 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 LIN52Q52LA3 116 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 PAGE3Q5JUK9 113 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 REP15Q6BDI9 236 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 C16orf89Q6UX73 402 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 DLEU7Q6UYE1 221 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 ZNF813Q6ZN06 617 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 TREML1Q86YW5 311 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 ZNF440Q8IYI8 595 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 FITM2Q8N6M3 262 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 C10orf53Q8N6V4 93 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 ICA1LQ8NDH6 482 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 MFSD8Q8NHS3 518 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 FGFBP3Q8TAT2 258 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 ZNF417Q8TAU3 575 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 MAGEE2Q8TD90 523 aaPredicted RBP5.65□□□□□ -1.5
CD44-221ENST00000526000 ZNF418Q8TF45 676 aaPredicted RBP5.65□□□□□ -1.5
CD44-221ENST00000526000 RDH5Q92781 318 aa5.65□□□□□ -1.5
CD44-221ENST00000526000 MRPL24Q96A35 216 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms