RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SMCO2A6NFE2 343 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 A6NIZ1 184 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 ERVV-1B6SEH8 477 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF701M0R085 212 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-211ENST00000525970 AIM2O14862 343 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 EIF4E2O60573 245 aaKnown RBP3.35□□□□□ -1.87
CSDE1-211ENST00000525970 TBL1XO60907 577 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 SERF1AO75920 110 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 BCKDHBP21953 392 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 U2AF2P26368 475 aaKnown RBP eCLIP3.35□□□□□ -1.873e-6■■■■■ 27
CSDE1-211ENST00000525970 NTSP30990 170 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 CASQ1P31415 396 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 AQP2P41181 271 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 SLC1A1P43005 524 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 RFX3P48380 749 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 CX3CR1P49238 355 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 SSR4P51571 173 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 SH3BGRP55822 239 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-211ENST00000525970 DSCR10P59022 87 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 RAP1BP61224 184 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 DNAJC3Q13217 504 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 PAGE2BQ5JRK9 111 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 SOHLH1Q5JUK2 328 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 C1orf100Q5SVJ3 147 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 UTF1Q5T230 341 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 OR52W1Q6IF63 320 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 FAM220AQ7Z4H9 259 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 LINC00523Q86TU6 105 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF677Q86XU0 584 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 OTUD6BQ8N6M0 293 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 OR51S1Q8NGJ8 323 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 ACOT11Q8WXI4 607 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-211ENST00000525970 KCTD14Q9BQ13 255 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-211ENST00000525970 GBA3Q9H227 469 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 NTN4Q9HB63 628 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 MTCH1Q9NZJ7 389 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 STOX2Q9P2F5 926 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-211ENST00000525970 Q9UF83 564 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 SLC17A4Q9Y2C5 497 aa3.35□□□□□ -1.87
CSDE1-211ENST00000525970 KIR2DL5BA0A0G2JN68 375 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 KIR2DL5BA0A0G2JPC4 375 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF99A8MXY4 864 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-211ENST00000525970 ZNF780AO75290 641 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-211ENST00000525970 BBOX1O75936 387 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 ERLIN2O94905 339 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 FGGP02679 453 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 ATP6V1B2P21281 511 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 HMOX2P30519 316 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 BMI1P35226 326 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 BEX5Q5H9J7 111 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 C1orf146Q5VVC0 180 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 STUMQ69YW2 141 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 MOB1BQ7L9L4 216 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 HDDC2Q7Z4H3 204 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 P2RY8Q86VZ1 359 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 PUSL1Q8N0Z8 303 aaKnown RBP3.34□□□□□ -1.87
CSDE1-211ENST00000525970 KIR2DL5AQ8N109 375 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 OR52E5Q8NH55 327 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 KIR2DL5BQ8NHK3 375 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 KIAA1143Q96AT1 154 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-211ENST00000525970 OPALINQ96PE5 141 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 XPO6Q96QU8 1125 aaKnown RBP3.34□□□□□ -1.87
CSDE1-211ENST00000525970 RIOK2Q9BVS4 552 aaKnown RBP3.34□□□□□ -1.87
CSDE1-211ENST00000525970 IL22Q9GZX6 179 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 FBXO44Q9H4M3 255 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 ZDHHC11Q9H8X9 412 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 CCNB1IP1Q9NPC3 277 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 RPS10P5Q9NQ39 176 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 TREM2Q9NZC2 230 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 CSAG2Q9Y5P2 127 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 COMMD3-BMI1R4GMX3 469 aa3.34□□□□□ -1.87
CSDE1-211ENST00000525970 CNTNAP1P78357 1384 aa3.34□□□□□ -1.88
CSDE1-211ENST00000525970 TMEM94Q12767 1356 aa3.34□□□□□ -1.88
CSDE1-211ENST00000525970 NEURL4Q96JN8 1562 aa3.34□□□□□ -1.88
CSDE1-211ENST00000525970 COL22A1Q8NFW1 1626 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 THSD7BQ9C0I4 1608 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 A0A0J9YYE9 177 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 ZBTB5O15062 677 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 AIREO43918 545 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 MGRN1O60291 552 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 TRBC1P01850 177 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 S100A9P06702 114 aaKnown RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 CMA1P23946 247 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 GLP1RP43220 463 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 ARRB1P49407 418 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 CRISP1P54107 249 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 DLX1P56177 255 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 RAD51Q06609 339 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 GPNMBQ14956 572 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 GSG1Q2KHT4 349 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 PGGHGQ32M88 737 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 ATAD3CQ5T2N8 411 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 Q6ZN92 141 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF589Q86UQ0 364 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-211ENST00000525970 CDC20BQ86Y33 519 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 APRG1Q8IVJ8 170 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 PRR22Q8IZ63 422 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 PDIK1LQ8N165 341 aa3.33□□□□□ -1.88
CSDE1-211ENST00000525970 LIX1Q8N485 282 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms