RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 NSG2Q9Y328 171 aa4.05□□□□□ -1.76
CD44-220ENST00000525688 ZNF175Q9Y473 711 aa4.05□□□□□ -1.76
CD44-220ENST00000525688 ETV7Q9Y603 341 aa4.05□□□□□ -1.76
CD44-220ENST00000525688 LAMA4Q16363 1823 aa4.05□□□□□ -1.76
CD44-220ENST00000525688 RANBP2P49792 3224 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 A0A0G2JMZ2 1700 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 SNURFLB1AK76 121 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 LRRN3E7EW58 273 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 E7EWF7 191 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 FAM72CH0Y354 149 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 BLOC1S5-TXNDC5H3BN57 136 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 OR7A17O14581 309 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 ZBTB5O15062 677 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 B4GALT5O43286 388 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 B3GAT3O94766 335 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 MATKP42679 507 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 HTR5AP47898 357 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 RFX3P48380 749 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 NOVA1P51513 510 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 OR1D5P58170 312 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 RAB10P61026 200 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 RPL10AP62906 217 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 CYP24A1Q07973 514 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 KRT81Q14533 505 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 NECTIN1Q15223 517 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 OR1C1Q15619 314 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 EXOC3L4Q17RC7 722 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 ZNF699Q32M78 642 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 C2CD6Q53TS8 623 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 CELF3Q5SZQ8 465 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 FAM72AQ5TYM5 149 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 AGAP7PQ5VUJ5 663 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 ZNF776Q68DI1 518 aaPredicted RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 FAM72DQ6L9T8 149 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 DPY19L2P2Q6ZN68 376 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 FCRLAQ7L513 359 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 ZNF546Q86UE3 836 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 FAM72BQ86X60 149 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 CACUL1Q86Y37 369 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 APLFQ8IW19 511 aaPredicted RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 SYS1Q8N2H4 156 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 CSNK1A1LQ8N752 337 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 C19orf18Q8NEA5 215 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 OR4C15Q8NGM1 316 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 TMEM239Q8WW34 195 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 TCP11Q8WWU5 503 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 NR4A3Q92570 626 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 SMARCD2Q92925 531 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 PPP1R36Q96LQ0 422 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 JSRP1Q96MG2 331 aaPredicted RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 NSMCE3Q96MG7 304 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 AGAP4Q96P64 663 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 MBOAT4Q96T53 435 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 GPR174Q9BXC1 333 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 GBA3Q9H227 469 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 NXF3Q9H4D5 531 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 ANKRD19PQ9H560 264 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 TRIM45Q9H8W5 580 aaPredicted RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 WDR54Q9H977 334 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 FOLH1BQ9HBA9 442 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 PRSS16Q9NQE7 514 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 ZNF71Q9NQZ8 489 aaPredicted RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 TECRQ9NZ01 308 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 MYEF2Q9P2K5 600 aaKnown RBP4.04□□□□□ -1.76
CD44-220ENST00000525688 IKZF3Q9UKT9 509 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 RAB23Q9ULC3 237 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 FADS3Q9Y5Q0 445 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 PARP14Q460N5 1801 aa4.04□□□□□ -1.76
CD44-220ENST00000525688 MGAMO43451 1857 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 STK36Q9NRP7 1315 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 A0A1W2PPV9 198 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 PMS2P5A8MQ11 134 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 NPIPA7E9PJI5 369 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 PGRMC1O00264 195 aaKnown RBP4.03□□□□□ -1.76
CD44-220ENST00000525688 AIM2O14862 343 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 XRCC2O43543 280 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 AIREO43918 545 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 N4BP1O75113 896 aaKnown RBP4.03□□□□□ -1.76
CD44-220ENST00000525688 ENTPD5O75356 428 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 SEC24AO95486 1093 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 RAB3DO95716 219 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 SLC25A27O95847 323 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 IGF1P05019 195 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 CT62P0C5K7 136 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 PRSS56P0CW18 603 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 NPIPA8P0DM63 369 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 MYL2P10916 166 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 SLC2A2P11168 524 aaPredicted RBP4.03□□□□□ -1.76
CD44-220ENST00000525688 ZNF43P17038 809 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 KITLGP21583 273 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 PCK1P35558 622 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 CEACAM3P40198 252 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 AQP2P41181 271 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 P2RY1P47900 373 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 MNAT1P51948 309 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 AP3S2P59780 193 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 MAGOHP61326 146 aaKnown RBP4.03□□□□□ -1.76
CD44-220ENST00000525688 S100A12P80511 92 aa4.03□□□□□ -1.76
CD44-220ENST00000525688 MRPS6P82932 125 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms